EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0018411 (Gene tree)
Gene ID: -
Gene Symbol: Bcl6b
Alias: Bazf
Full Name: B cell CLL/lymphoma 6%2C member B
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 5671 bases
Position: chr11:67287231-67292901
Accession: 1278332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0030009	zf-C2H2	PF00096.26	6.8e-16	1	2
MGP_FVBNJ_P0030009	zf-C2H2	PF00096.26	6.8e-16	2	2
MGP_FVBNJ_P0030009	zf-met	PF12874.7	9.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0030009	-	3366	-	MGP_FVBNJ_P0030009	474 (aa)	-	O88282
MGP_FVBNJ_T0030010	-	384	-	MGP_FVBNJ_P0030010	116 (aa)	-	-
MGP_FVBNJ_T0030011	-	652	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0018411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0018411's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0018411	Bcl6b	82	38.739	MGP_FVBNJ_G0022635	Zbtb20	61	38.739
MGP_FVBNJ_G0018411	Bcl6b	54	47.368	MGP_FVBNJ_G0029280	Zbtb49	60	45.714
MGP_FVBNJ_G0018411	Bcl6b	94	40.299	MGP_FVBNJ_G0017006	Zbtb24	71	37.640
MGP_FVBNJ_G0018411	Bcl6b	96	52.713	MGP_FVBNJ_G0022498	Bcl6	69	52.756
MGP_FVBNJ_G0018411	Bcl6b	62	44.853	MGP_FVBNJ_G0023030	Zfp51	82	44.853
MGP_FVBNJ_G0018411	Bcl6b	96	32.692	MGP_FVBNJ_G0020786	Zfp131	50	36.667
MGP_FVBNJ_G0018411	Bcl6b	56	49.645	MGP_FVBNJ_G0026916	Mynn	86	49.645
MGP_FVBNJ_G0018411	Bcl6b	97	34.483	MGP_FVBNJ_G0025500	Zbtb6	97	34.483
MGP_FVBNJ_G0018411	Bcl6b	68	45.312	MGP_FVBNJ_G0028827	Zbtb17	74	44.444
MGP_FVBNJ_G0018411	Bcl6b	54	48.148	MGP_FVBNJ_G0020511	Zfp759	88	48.148