EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0018717 (Gene tree)
Gene ID: -
Gene Symbol: Dhx40
Alias: 2410016C14Rik|ARG147|DDX40|PAD
Full Name: DEAH (Asp-Glu-Ala-His) box polypeptide 40
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 39441 bases
Position: chr11:84018021-84057461
Accession: 1914737
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0031252	DEAD	PF00270.29	7e-09	1	1
MGP_FVBNJ_P0031253	HA2	PF04408.23	3e-15	1	1
MGP_FVBNJ_P0031252	HA2	PF04408.23	6.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0031253	-	912	-	MGP_FVBNJ_P0031253	304 (aa)	-	-
MGP_FVBNJ_T0031252	-	3769	-	MGP_FVBNJ_P0031252	779 (aa)	-	Q6PE54
MGP_FVBNJ_T0031255	-	626	-	-	- (aa)	-	-
MGP_FVBNJ_T0031254	-	641	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0018717's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0018717's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0018717	Dhx40	99	32.766	MGP_FVBNJ_G0018446	Dhx33	89	37.348
MGP_FVBNJ_G0018717	Dhx40	84	40.429	MGP_FVBNJ_G0033864	Dhx38	54	38.549
MGP_FVBNJ_G0018717	Dhx40	99	34.728	MGP_FVBNJ_G0029318	Dhx15	79	43.103
MGP_FVBNJ_G0018717	Dhx40	90	35.262	MGP_FVBNJ_G0026600	Dhx35	99	35.262
MGP_FVBNJ_G0018717	Dhx40	97	40.088	MGP_FVBNJ_G0019033	Dhx8	53	43.645
MGP_FVBNJ_G0018717	Dhx40	99	37.004	MGP_FVBNJ_G0023457	Dhx16	61	42.012
MGP_FVBNJ_G0018717	Dhx40	83	42.041	MGP_FVBNJ_G0029881	Dhx37	64	42.041
MGP_FVBNJ_G0018717	Dhx40	66	30.576	MGP_FVBNJ_G0019958	Tdrd9	89	31.417