EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0018742 (Gene tree)
Gene ID: -
Gene Symbol: Srsf1
Alias: 1110054N12Rik|5730507C05Rik|6330415C05Rik|AI482334|AW491331|Asf|Sf2|Sfrs1
Full Name: serine/arginine-rich splicing factor 1
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 6378 bases
Position: chr11:85314381-85320758
Accession: 98283
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0031349	RRM_1	PF00076.22	6.2e-34	1	2
MGP_FVBNJ_P0031349	RRM_1	PF00076.22	6.2e-34	2	2
MGP_FVBNJ_P0031348	RRM_1	PF00076.22	2.4e-33	1	2
MGP_FVBNJ_P0031348	RRM_1	PF00076.22	2.4e-33	2	2
MGP_FVBNJ_P0031351	RRM_1	PF00076.22	2.6e-33	1	2
MGP_FVBNJ_P0031351	RRM_1	PF00076.22	2.6e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0031354	-	758	-	-	- (aa)	-	-
MGP_FVBNJ_T0031349	-	2948	-	MGP_FVBNJ_P0031349	201 (aa)	-	-
MGP_FVBNJ_T0031348	-	5357	-	MGP_FVBNJ_P0031348	248 (aa)	-	Q6PDM2
MGP_FVBNJ_T0031350	-	647	-	-	- (aa)	-	-
MGP_FVBNJ_T0031351	-	1209	-	MGP_FVBNJ_P0031351	253 (aa)	-	-
MGP_FVBNJ_T0031352	-	895	-	MGP_FVBNJ_P0031352	105 (aa)	-	-
MGP_FVBNJ_T0031353	-	401	-	MGP_FVBNJ_P0031353	57 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0018742's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0018742's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0018742	Srsf1	85	44.886	MGP_FVBNJ_G0019710	Srsf5	96	51.020
MGP_FVBNJ_G0018742	Srsf1	82	42.857	MGP_FVBNJ_G0026611	Srsf6	58	40.670
MGP_FVBNJ_G0018742	Srsf1	79	79.762	MGP_FVBNJ_G0029734	Srsf9	78	70.330