EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0018747 (Gene tree)
Gene ID: -
Gene Symbol: Msi2
Alias: 1700105C15Rik|AI451722|AI563628|AW489193|Msi2h|Musashi2|msi2h
Full Name: musashi RNA-binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 382519 bases
Position: chr11:85621531-86004049
Accession: 1923876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0031371	RRM_1	PF00076.22	6.3e-34	1	2
MGP_FVBNJ_P0031371	RRM_1	PF00076.22	6.3e-34	2	2
MGP_FVBNJ_P0031372	RRM_1	PF00076.22	6.5e-34	1	2
MGP_FVBNJ_P0031372	RRM_1	PF00076.22	6.5e-34	2	2
MGP_FVBNJ_P0031375	RRM_1	PF00076.22	3.8e-22	1	1
MGP_FVBNJ_P0031376	RRM_1	PF00076.22	3.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0031372	-	1857	-	MGP_FVBNJ_P0031372	346 (aa)	-	-
MGP_FVBNJ_T0031373	-	1749	-	-	- (aa)	-	-
MGP_FVBNJ_T0031371	-	6335	XM_006534432	MGP_FVBNJ_P0031371	328 (aa)	XP_006534495	Q920Q6
MGP_FVBNJ_T0031376	-	634	-	MGP_FVBNJ_P0031376	157 (aa)	-	-
MGP_FVBNJ_T0031377	-	595	-	-	- (aa)	-	-
MGP_FVBNJ_T0031374	-	2530	-	-	- (aa)	-	-
MGP_FVBNJ_T0031375	-	405	-	MGP_FVBNJ_P0031375	113 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0018747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0018747's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0018747	Msi2	100	54.867	MGP_FVBNJ_G0029554	Hnrnpdl	78	41.634
MGP_FVBNJ_G0018747	Msi2	50	33.333	MGP_FVBNJ_G0015880	Boll	65	32.857
MGP_FVBNJ_G0018747	Msi2	80	34.074	MGP_FVBNJ_G0026751	Rbm38	70	38.095
MGP_FVBNJ_G0018747	Msi2	100	44.348	MGP_FVBNJ_G0030504	Hnrnpa2b1	56	48.193
MGP_FVBNJ_G0018747	Msi2	70	31.250	MGP_FVBNJ_G0028225	Elavl2	72	32.632
MGP_FVBNJ_G0018747	Msi2	100	35.398	MGP_FVBNJ_G0028906	Tardbp	79	31.818
MGP_FVBNJ_G0018747	Msi2	99	41.228	MGP_FVBNJ_G0020438	Hnrnpa0	68	41.989
MGP_FVBNJ_G0018747	Msi2	61	42.857	MGP_FVBNJ_G0035297	Rbm3	82	43.243
MGP_FVBNJ_G0018747	Msi2	100	90.323	MGP_FVBNJ_G0029738	Msi1	99	75.665
MGP_FVBNJ_G0018747	Msi2	61	42.857	MGP_FVBNJ_G0035499	Rbmx	88	45.205
MGP_FVBNJ_G0018747	Msi2	100	53.982	MGP_FVBNJ_G0029552	Hnrnpd	100	72.000
MGP_FVBNJ_G0018747	Msi2	100	46.087	MGP_FVBNJ_G0025662	Hnrnpa3	52	46.087
MGP_FVBNJ_G0018747	Msi2	61	41.429	MGP_FVBNJ_G0017321	Cirbp	88	43.243
MGP_FVBNJ_G0018747	Msi2	99	42.400	MGP_FVBNJ_G0017327	Dazap1	92	49.462
MGP_FVBNJ_G0018747	Msi2	84	30.208	MGP_FVBNJ_G0028357	Elavl4	78	30.088
MGP_FVBNJ_G0018747	Msi2	60	33.824	MGP_FVBNJ_G0019803	Slirp	70	33.824
MGP_FVBNJ_G0018747	Msi2	100	52.212	MGP_FVBNJ_G0018097	Hnrnpab	70	48.039