EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0019136 (Gene tree)
Gene ID: -
Gene Symbol: Ddx5
Alias: 2600009A06Rik|G17P1|HUMP68|Hlr1|p68
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 8503 bases
Position: chr11:104397173-104405675
Accession: 105037
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0032882	DEAD	PF00270.29	2.1e-47	1	1
MGP_FVBNJ_P0032887	DEAD	PF00270.29	1.5e-15	1	1
MGP_FVBNJ_P0032888	DEAD	PF00270.29	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0032883	-	3149	-	MGP_FVBNJ_P0032883	406 (aa)	-	-
MGP_FVBNJ_T0032882	-	3107	XM_006532135	MGP_FVBNJ_P0032882	508 (aa)	XP_006532198	B1ARB9
MGP_FVBNJ_T0032885	-	708	-	-	- (aa)	-	-
MGP_FVBNJ_T0032884	-	496	-	-	- (aa)	-	-
MGP_FVBNJ_T0032887	-	861	-	MGP_FVBNJ_P0032887	182 (aa)	-	-
MGP_FVBNJ_T0032886	-	810	-	-	- (aa)	-	-
MGP_FVBNJ_T0032888	-	831	-	MGP_FVBNJ_P0032888	167 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0019136's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0019136's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0019136	Ddx5	80	42.522	MGP_FVBNJ_G0035327	Ddx3x	61	43.276
MGP_FVBNJ_G0019136	Ddx5	73	31.148	MGP_FVBNJ_G0034291	Ddx25	73	32.425
MGP_FVBNJ_G0019136	Ddx5	81	38.235	MGP_FVBNJ_G0020413	Ddx41	64	39.163
MGP_FVBNJ_G0019136	Ddx5	89	45.040	MGP_FVBNJ_G0034823	Ddx43	68	44.519
MGP_FVBNJ_G0019136	Ddx5	80	38.922	MGP_FVBNJ_G0020746	Ddx4	57	39.012
MGP_FVBNJ_G0019136	Ddx5	72	30.462	MGP_FVBNJ_G0019302	Eif4a3	83	32.447
MGP_FVBNJ_G0019136	Ddx5	66	30.029	MGP_FVBNJ_G0023433	Ddx39b	77	30.029
MGP_FVBNJ_G0019136	Ddx5	93	83.598	MGP_FVBNJ_G0021887	Ddx17	72	82.415
MGP_FVBNJ_G0019136	Ddx5	86	32.857	MGP_FVBNJ_G0016388	Ddx59	66	33.094
MGP_FVBNJ_G0019136	Ddx5	82	42.105	MGP_FVBNJ_G0016758	D1Pas1	61	43.032
MGP_FVBNJ_G0019136	Ddx5	81	36.389	MGP_FVBNJ_G0022113	Ddx23	50	37.915
MGP_FVBNJ_G0019136	Ddx5	74	30.070	MGP_FVBNJ_G0025340	Ddx31	56	31.313
MGP_FVBNJ_G0019136	Ddx5	77	31.204	MGP_FVBNJ_G0018685	Ddx52	66	31.204
MGP_FVBNJ_G0019136	Ddx5	78	32.110	MGP_FVBNJ_G0022488	Eif4a2	92	33.714
MGP_FVBNJ_G0019136	Ddx5	68	30.137	MGP_FVBNJ_G0029869	Ddx55	57	30.137
MGP_FVBNJ_G0019136	Ddx5	76	34.062	MGP_FVBNJ_G0033461	Ddx49	97	35.211
MGP_FVBNJ_G0019136	Ddx5	71	37.457	MGP_FVBNJ_G0031183	Ddx47	80	37.389
MGP_FVBNJ_G0019136	Ddx5	70	33.446	MGP_FVBNJ_G0017135	Ddx50	51	34.302