EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0019270 (Gene tree)
Gene ID: -
Gene Symbol: Sept9
Alias: Kiaa0991|MSF1|Msf|PNUTL4|SL3-3 integration site 1|Sint1
Full Name: septin 9
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 168605 bases
Position: chr11:115060409-115229013
Accession: 1858222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0033554	MMR_HSR1	PF01926.23	1.3e-09	1	1
MGP_FVBNJ_P0033551	MMR_HSR1	PF01926.23	5.8e-09	1	1
MGP_FVBNJ_P0033552	MMR_HSR1	PF01926.23	6e-09	1	1
MGP_FVBNJ_P0033550	MMR_HSR1	PF01926.23	6.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0033554	-	778	-	MGP_FVBNJ_P0033554	242 (aa)	-	-
MGP_FVBNJ_T0033555	-	4863	-	-	- (aa)	-	-
MGP_FVBNJ_T0033556	-	647	-	-	- (aa)	-	-
MGP_FVBNJ_T0033557	-	555	-	-	- (aa)	-	-
MGP_FVBNJ_T0033550	-	3613	XM_006533744	MGP_FVBNJ_P0033550	583 (aa)	XP_006533807	Q80UG5
MGP_FVBNJ_T0033551	-	3866	-	MGP_FVBNJ_P0033551	565 (aa)	-	-
MGP_FVBNJ_T0033552	-	3493	-	MGP_FVBNJ_P0033552	576 (aa)	-	-
MGP_FVBNJ_T0033553	-	374	-	MGP_FVBNJ_P0033553	74 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0019270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0019270's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0019270	Sept9	81	44.949	MGP_FVBNJ_G0017085	Sept10	67	43.836
MGP_FVBNJ_G0019270	Sept9	81	52.551	MGP_FVBNJ_G0018728	Sept4	92	50.467
MGP_FVBNJ_G0019270	Sept9	90	47.297	MGP_FVBNJ_G0022425	Sept5	85	45.860
MGP_FVBNJ_G0019270	Sept9	81	45.455	MGP_FVBNJ_G0018126	Sept8	68	42.000
MGP_FVBNJ_G0019270	Sept9	81	46.970	MGP_FVBNJ_G0029530	Sept11	67	42.953
MGP_FVBNJ_G0019270	Sept9	81	51.269	MGP_FVBNJ_G0034252	Sept7	68	49.502
MGP_FVBNJ_G0019270	Sept9	83	46.000	MGP_FVBNJ_G0032802	Sept1	100	50.000
MGP_FVBNJ_G0019270	Sept9	82	75.377	MGP_FVBNJ_G0021947	Sept3	87	73.720
MGP_FVBNJ_G0019270	Sept9	88	49.767	MGP_FVBNJ_G0016187	Sept2	100	49.778
MGP_FVBNJ_G0019270	Sept9	81	46.970	MGP_FVBNJ_G0035383	Sept6	99	36.552
MGP_FVBNJ_G0019270	Sept9	82	64.322	MGP_FVBNJ_G0022288	Sept12	78	65.462