EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0019385 (Gene tree)
Gene ID: -
Gene Symbol: Dnajc27
Alias: AI639580|C330021A05Rik|Rabj|Rbj
Full Name: DnaJ heat shock protein family (Hsp40) member C27
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 29158 bases
Position: chr12:927997-957154
Accession: 2443036
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0034121	MMR_HSR1	PF01926.23	3.8e-05	1	1
MGP_FVBNJ_P0034122	MMR_HSR1	PF01926.23	3.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0034121	-	4713	XM_006515052	MGP_FVBNJ_P0034121	273 (aa)	XP_006515115	Q8CFP6
MGP_FVBNJ_T0034122	-	2934	-	MGP_FVBNJ_P0034122	273 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0019385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0019385's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0019385	Dnajc27	66	30.220	MGP_FVBNJ_G0019195	Rab37	80	30.220
MGP_FVBNJ_G0019385	Dnajc27	70	30.693	MGP_FVBNJ_G0025457	Rab14	92	31.250
MGP_FVBNJ_G0019385	Dnajc27	58	31.447	MGP_FVBNJ_G0026758	Rab22a	79	31.447
MGP_FVBNJ_G0019385	Dnajc27	61	34.731	MGP_FVBNJ_G0023927	Rab18	79	34.731
MGP_FVBNJ_G0019385	Dnajc27	63	33.714	MGP_FVBNJ_G0023772	Rab31	87	33.714
MGP_FVBNJ_G0019385	Dnajc27	64	30.286	MGP_FVBNJ_G0035613	Rab39b	80	30.286
MGP_FVBNJ_G0019385	Dnajc27	60	30.178	MGP_FVBNJ_G0036009	Rab9	82	30.178
MGP_FVBNJ_G0019385	Dnajc27	60	32.927	MGP_FVBNJ_G0027821	Rab2a	75	32.927
MGP_FVBNJ_G0019385	Dnajc27	60	30.303	MGP_FVBNJ_G0034698	Rab11a	74	30.303
MGP_FVBNJ_G0019385	Dnajc27	56	33.117	MGP_FVBNJ_G0035444	Rab33a	63	33.117
MGP_FVBNJ_G0019385	Dnajc27	60	31.325	MGP_FVBNJ_G0035852	Rab9b	82	31.325
MGP_FVBNJ_G0019385	Dnajc27	58	32.278	MGP_FVBNJ_G0021106	Rab2b	78	32.692