EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0019410 (Gene tree)
Gene ID: -
Gene Symbol: Pum2
Alias: 5730503J23Rik|Kiaa0235|Pumm2
Full Name: pumilio RNA-binding family member 2
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 78811 bases
Position: chr12:5506625-5585435
Accession: 1931751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0034178	PUF	PF00806.19	1.4e-73	1	8
MGP_FVBNJ_P0034178	PUF	PF00806.19	1.4e-73	2	8
MGP_FVBNJ_P0034178	PUF	PF00806.19	1.4e-73	3	8
MGP_FVBNJ_P0034178	PUF	PF00806.19	1.4e-73	4	8
MGP_FVBNJ_P0034178	PUF	PF00806.19	1.4e-73	5	8
MGP_FVBNJ_P0034178	PUF	PF00806.19	1.4e-73	6	8
MGP_FVBNJ_P0034178	PUF	PF00806.19	1.4e-73	7	8
MGP_FVBNJ_P0034178	PUF	PF00806.19	1.4e-73	8	8
MGP_FVBNJ_P0034176	PUF	PF00806.19	1.5e-73	1	8
MGP_FVBNJ_P0034176	PUF	PF00806.19	1.5e-73	2	8
MGP_FVBNJ_P0034176	PUF	PF00806.19	1.5e-73	3	8
MGP_FVBNJ_P0034176	PUF	PF00806.19	1.5e-73	4	8
MGP_FVBNJ_P0034176	PUF	PF00806.19	1.5e-73	5	8
MGP_FVBNJ_P0034176	PUF	PF00806.19	1.5e-73	6	8
MGP_FVBNJ_P0034176	PUF	PF00806.19	1.5e-73	7	8
MGP_FVBNJ_P0034176	PUF	PF00806.19	1.5e-73	8	8
MGP_FVBNJ_P0034184	PUF	PF00806.19	1.5e-73	1	8
MGP_FVBNJ_P0034184	PUF	PF00806.19	1.5e-73	2	8
MGP_FVBNJ_P0034184	PUF	PF00806.19	1.5e-73	3	8
MGP_FVBNJ_P0034184	PUF	PF00806.19	1.5e-73	4	8
MGP_FVBNJ_P0034184	PUF	PF00806.19	1.5e-73	5	8
MGP_FVBNJ_P0034184	PUF	PF00806.19	1.5e-73	6	8
MGP_FVBNJ_P0034184	PUF	PF00806.19	1.5e-73	7	8
MGP_FVBNJ_P0034184	PUF	PF00806.19	1.5e-73	8	8
MGP_FVBNJ_P0034177	PUF	PF00806.19	3.1e-73	1	8
MGP_FVBNJ_P0034177	PUF	PF00806.19	3.1e-73	2	8
MGP_FVBNJ_P0034177	PUF	PF00806.19	3.1e-73	3	8
MGP_FVBNJ_P0034177	PUF	PF00806.19	3.1e-73	4	8
MGP_FVBNJ_P0034177	PUF	PF00806.19	3.1e-73	5	8
MGP_FVBNJ_P0034177	PUF	PF00806.19	3.1e-73	6	8
MGP_FVBNJ_P0034177	PUF	PF00806.19	3.1e-73	7	8
MGP_FVBNJ_P0034177	PUF	PF00806.19	3.1e-73	8	8
MGP_FVBNJ_P0034179	PUF	PF00806.19	3.1e-73	1	8
MGP_FVBNJ_P0034179	PUF	PF00806.19	3.1e-73	2	8
MGP_FVBNJ_P0034179	PUF	PF00806.19	3.1e-73	3	8
MGP_FVBNJ_P0034179	PUF	PF00806.19	3.1e-73	4	8
MGP_FVBNJ_P0034179	PUF	PF00806.19	3.1e-73	5	8
MGP_FVBNJ_P0034179	PUF	PF00806.19	3.1e-73	6	8
MGP_FVBNJ_P0034179	PUF	PF00806.19	3.1e-73	7	8
MGP_FVBNJ_P0034179	PUF	PF00806.19	3.1e-73	8	8
MGP_FVBNJ_P0034183	PUF	PF00806.19	1.4e-72	1	8
MGP_FVBNJ_P0034183	PUF	PF00806.19	1.4e-72	2	8
MGP_FVBNJ_P0034183	PUF	PF00806.19	1.4e-72	3	8
MGP_FVBNJ_P0034183	PUF	PF00806.19	1.4e-72	4	8
MGP_FVBNJ_P0034183	PUF	PF00806.19	1.4e-72	5	8
MGP_FVBNJ_P0034183	PUF	PF00806.19	1.4e-72	6	8
MGP_FVBNJ_P0034183	PUF	PF00806.19	1.4e-72	7	8
MGP_FVBNJ_P0034183	PUF	PF00806.19	1.4e-72	8	8
MGP_FVBNJ_P0034185	PUF	PF00806.19	1.4e-72	1	8
MGP_FVBNJ_P0034185	PUF	PF00806.19	1.4e-72	2	8
MGP_FVBNJ_P0034185	PUF	PF00806.19	1.4e-72	3	8
MGP_FVBNJ_P0034185	PUF	PF00806.19	1.4e-72	4	8
MGP_FVBNJ_P0034185	PUF	PF00806.19	1.4e-72	5	8
MGP_FVBNJ_P0034185	PUF	PF00806.19	1.4e-72	6	8
MGP_FVBNJ_P0034185	PUF	PF00806.19	1.4e-72	7	8
MGP_FVBNJ_P0034185	PUF	PF00806.19	1.4e-72	8	8
MGP_FVBNJ_P0034191	PUF	PF00806.19	4.1e-40	1	4
MGP_FVBNJ_P0034191	PUF	PF00806.19	4.1e-40	2	4
MGP_FVBNJ_P0034191	PUF	PF00806.19	4.1e-40	3	4
MGP_FVBNJ_P0034191	PUF	PF00806.19	4.1e-40	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0034188	-	472	-	MGP_FVBNJ_P0034188	109 (aa)	-	-
MGP_FVBNJ_T0034192	-	612	-	-	- (aa)	-	-
MGP_FVBNJ_T0034190	-	706	-	MGP_FVBNJ_P0034190	234 (aa)	-	-
MGP_FVBNJ_T0034184	-	3286	-	MGP_FVBNJ_P0034184	985 (aa)	-	-
MGP_FVBNJ_T0034186	-	902	-	MGP_FVBNJ_P0034186	262 (aa)	-	-
MGP_FVBNJ_T0034187	-	648	-	MGP_FVBNJ_P0034187	185 (aa)	-	-
MGP_FVBNJ_T0034179	-	6422	-	MGP_FVBNJ_P0034179	1064 (aa)	-	-
MGP_FVBNJ_T0034178	-	3578	-	MGP_FVBNJ_P0034178	980 (aa)	-	-
MGP_FVBNJ_T0034182	-	6301	-	MGP_FVBNJ_P0034182	1008 (aa)	-	-
MGP_FVBNJ_T0034183	-	3554	-	MGP_FVBNJ_P0034183	1066 (aa)	-	-
MGP_FVBNJ_T0034180	-	518	-	-	- (aa)	-	-
MGP_FVBNJ_T0034181	-	6209	-	MGP_FVBNJ_P0034181	35 (aa)	-	-
MGP_FVBNJ_T0034191	-	665	-	MGP_FVBNJ_P0034191	221 (aa)	-	-
MGP_FVBNJ_T0034177	-	4975	-	MGP_FVBNJ_P0034177	1064 (aa)	-	-
MGP_FVBNJ_T0034176	-	5866	XM_006515277	MGP_FVBNJ_P0034176	985 (aa)	XP_006515340	Q80U58
MGP_FVBNJ_T0034185	-	6217	-	MGP_FVBNJ_P0034185	1066 (aa)	-	-
MGP_FVBNJ_T0034189	-	994	-	MGP_FVBNJ_P0034189	35 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0019410's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0019410's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0019410	Pum2	100	88.835	MGP_FVBNJ_G0028631	Pum1	86	87.294