EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0019710 (Gene tree)
Gene ID: -
Gene Symbol: Srsf5
Alias: Hrs|Sfrs5
Full Name: serine/arginine-rich splicing factor 5
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 5117 bases
Position: chr12:76824472-76829588
Accession: 98287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0034980	RRM_1	PF00076.22	2.6e-30	1	2
MGP_FVBNJ_P0034980	RRM_1	PF00076.22	2.6e-30	2	2
MGP_FVBNJ_P0034985	RRM_1	PF00076.22	2.6e-30	1	2
MGP_FVBNJ_P0034985	RRM_1	PF00076.22	2.6e-30	2	2
MGP_FVBNJ_P0034990	RRM_1	PF00076.22	2.6e-30	1	2
MGP_FVBNJ_P0034990	RRM_1	PF00076.22	2.6e-30	2	2
MGP_FVBNJ_P0034982	RRM_1	PF00076.22	2.6e-30	1	2
MGP_FVBNJ_P0034982	RRM_1	PF00076.22	2.6e-30	2	2
MGP_FVBNJ_P0034984	RRM_1	PF00076.22	2.6e-30	1	2
MGP_FVBNJ_P0034984	RRM_1	PF00076.22	2.6e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0034991	-	3494	-	-	- (aa)	-	-
MGP_FVBNJ_T0034990	-	1681	-	MGP_FVBNJ_P0034990	305 (aa)	-	-
MGP_FVBNJ_T0034988	-	547	-	MGP_FVBNJ_P0034988	46 (aa)	-	-
MGP_FVBNJ_T0034989	-	489	-	-	- (aa)	-	-
MGP_FVBNJ_T0034986	-	538	-	-	- (aa)	-	-
MGP_FVBNJ_T0034987	-	886	-	-	- (aa)	-	-
MGP_FVBNJ_T0034984	-	1611	-	MGP_FVBNJ_P0034984	306 (aa)	-	-
MGP_FVBNJ_T0034985	-	1604	-	MGP_FVBNJ_P0034985	305 (aa)	-	-
MGP_FVBNJ_T0034982	-	1623	-	MGP_FVBNJ_P0034982	306 (aa)	-	-
MGP_FVBNJ_T0034983	-	2732	-	-	- (aa)	-	-
MGP_FVBNJ_T0034980	-	1640	XM_006515629	MGP_FVBNJ_P0034980	305 (aa)	XP_006515692	O35326
MGP_FVBNJ_T0034981	-	2952	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0019710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0019710's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0019710	Srsf5	89	48.780	MGP_FVBNJ_G0029734	Srsf9	68	39.394
MGP_FVBNJ_G0019710	Srsf5	96	51.020	MGP_FVBNJ_G0018742	Srsf1	85	44.886
MGP_FVBNJ_G0019710	Srsf5	89	63.415	MGP_FVBNJ_G0026611	Srsf6	50	71.642