EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0019958 (Gene tree)
Gene ID: -
Gene Symbol: Tdrd9
Alias: 4930441E05Rik
Full Name: tudor domain containing 9
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 88840 bases
Position: chr12:108290260-108379099
Accession: 1921941
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0035788	TUDOR	PF00567.24	6.8e-15	1	1
MGP_FVBNJ_P0035788	DEAD	PF00270.29	1.3e-07	1	1
MGP_FVBNJ_P0035788	HA2	PF04408.23	2.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0035798	-	456	-	-	- (aa)	-	-
MGP_FVBNJ_T0035799	-	486	-	-	- (aa)	-	-
MGP_FVBNJ_T0035788	-	4813	XM_006516316	MGP_FVBNJ_P0035788	1383 (aa)	XP_006516379	Q14BI7
MGP_FVBNJ_T0035794	-	3894	-	MGP_FVBNJ_P0035794	1297 (aa)	-	-
MGP_FVBNJ_T0035795	-	3681	-	MGP_FVBNJ_P0035795	216 (aa)	-	-
MGP_FVBNJ_T0035796	-	3366	-	MGP_FVBNJ_P0035796	539 (aa)	-	-
MGP_FVBNJ_T0035797	-	799	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0019958's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0019958's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0019958	Tdrd9	88	30.081	MGP_FVBNJ_G0029318	Dhx15	71	30.081
MGP_FVBNJ_G0019958	Tdrd9	89	31.417	MGP_FVBNJ_G0018717	Dhx40	66	30.576
MGP_FVBNJ_G0019958	Tdrd9	99	34.251	MGP_FVBNJ_G0027053	Dhx36	57	34.338
MGP_FVBNJ_G0019958	Tdrd9	95	32.448	MGP_FVBNJ_G0018446	Dhx33	77	31.000
MGP_FVBNJ_G0019958	Tdrd9	95	33.843	MGP_FVBNJ_G0035098	Dhx30	51	32.248