EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0020090 (Gene tree)
Gene ID: -
Gene Symbol: Zkscan4
Alias: AI841875|Gm11272|OTTMUSG00000000421
Full Name: zinc finger with KRAB and SCAN domains 4
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 6671 bases
Position: chr13:17637770-17644440
Accession: 3649412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0036156	zf-C2H2	PF00096.26	7.6e-45	1	8
MGP_FVBNJ_P0036156	zf-C2H2	PF00096.26	7.6e-45	2	8
MGP_FVBNJ_P0036156	zf-C2H2	PF00096.26	7.6e-45	3	8
MGP_FVBNJ_P0036156	zf-C2H2	PF00096.26	7.6e-45	4	8
MGP_FVBNJ_P0036156	zf-C2H2	PF00096.26	7.6e-45	5	8
MGP_FVBNJ_P0036156	zf-C2H2	PF00096.26	7.6e-45	6	8
MGP_FVBNJ_P0036156	zf-C2H2	PF00096.26	7.6e-45	7	8
MGP_FVBNJ_P0036156	zf-C2H2	PF00096.26	7.6e-45	8	8
MGP_FVBNJ_P0036156	zf-met	PF12874.7	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0036156	-	2482	-	MGP_FVBNJ_P0036156	505 (aa)	-	Q5SZT6

Gene Model

Click here to download MGP_FVBNJ_G0020090's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0020090's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0020090	Zkscan4	52	45.627	MGP_FVBNJ_G0018226	Zfp867	81	45.627
MGP_FVBNJ_G0020090	Zkscan4	53	50.000	MGP_FVBNJ_G0034174	Zfp26	79	50.000
MGP_FVBNJ_G0020090	Zkscan4	56	51.136	MGP_FVBNJ_G0031891	-	78	51.136
MGP_FVBNJ_G0020090	Zkscan4	56	38.788	MGP_FVBNJ_G0033745	Zfp319	87	37.200
MGP_FVBNJ_G0020090	Zkscan4	52	44.706	MGP_FVBNJ_G0026691	Zfp334	62	44.706
MGP_FVBNJ_G0020090	Zkscan4	67	49.606	MGP_FVBNJ_G0031593	Zfp235	73	49.782
MGP_FVBNJ_G0020090	Zkscan4	53	46.825	MGP_FVBNJ_G0028827	Zbtb17	56	39.781
MGP_FVBNJ_G0020090	Zkscan4	56	52.239	MGP_FVBNJ_G0031768	Zfp420	99	51.210
MGP_FVBNJ_G0020090	Zkscan4	51	49.206	MGP_FVBNJ_G0032808	Zfp768	52	51.163
MGP_FVBNJ_G0020090	Zkscan4	56	48.276	MGP_FVBNJ_G0031599	Zfp61	52	51.497
MGP_FVBNJ_G0020090	Zkscan4	56	52.000	MGP_FVBNJ_G0031597	Zfp108	70	52.000
MGP_FVBNJ_G0020090	Zkscan4	56	54.497	MGP_FVBNJ_G0031595	Zfp111	73	54.497
MGP_FVBNJ_G0020090	Zkscan4	56	57.317	MGP_FVBNJ_G0031594	Zfp114	65	57.317
MGP_FVBNJ_G0020090	Zkscan4	67	53.804	MGP_FVBNJ_G0031592	Zfp112	56	53.804
MGP_FVBNJ_G0020090	Zkscan4	53	54.070	MGP_FVBNJ_G0018082	Zfp454	68	54.070
MGP_FVBNJ_G0020090	Zkscan4	56	45.455	MGP_FVBNJ_G0018176	Zfp672	100	41.975
MGP_FVBNJ_G0020090	Zkscan4	57	46.023	MGP_FVBNJ_G0030470	Repin1	95	46.023
MGP_FVBNJ_G0020090	Zkscan4	61	47.059	MGP_FVBNJ_G0026260	Zfp661	75	47.059
MGP_FVBNJ_G0020090	Zkscan4	53	46.863	MGP_FVBNJ_G0023028	Zfp677	82	46.863
MGP_FVBNJ_G0020090	Zkscan4	53	46.774	MGP_FVBNJ_G0029280	Zbtb49	66	46.479
MGP_FVBNJ_G0020090	Zkscan4	51	42.460	MGP_FVBNJ_G0032811	E430018J23Rik	59	42.857
MGP_FVBNJ_G0020090	Zkscan4	56	50.365	MGP_FVBNJ_G0032810	Zfp747	53	50.365
MGP_FVBNJ_G0020090	Zkscan4	54	52.326	MGP_FVBNJ_G0031340	Zfp628	62	43.602
MGP_FVBNJ_G0020090	Zkscan4	56	47.826	MGP_FVBNJ_G0030604	Prdm5	78	44.138
MGP_FVBNJ_G0020090	Zkscan4	51	48.031	MGP_FVBNJ_G0029613	Gfi1	99	48.031
MGP_FVBNJ_G0020090	Zkscan4	60	46.296	MGP_FVBNJ_G0031348	Zfp865	80	36.681
MGP_FVBNJ_G0020090	Zkscan4	51	54.032	MGP_FVBNJ_G0030950	Zfp637	71	45.455
MGP_FVBNJ_G0020090	Zkscan4	55	54.749	MGP_FVBNJ_G0033900	Zfp1	75	54.749
MGP_FVBNJ_G0020090	Zkscan4	69	47.566	MGP_FVBNJ_G0023030	Zfp51	99	47.566
MGP_FVBNJ_G0020090	Zkscan4	56	35.859	MGP_FVBNJ_G0026729	Zfp64	72	35.859
MGP_FVBNJ_G0020090	Zkscan4	56	44.364	MGP_FVBNJ_G0020511	Zfp759	88	46.259
MGP_FVBNJ_G0020090	Zkscan4	58	46.460	MGP_FVBNJ_G0020510	Rslcan18	74	46.460
MGP_FVBNJ_G0020090	Zkscan4	95	42.197	MGP_FVBNJ_G0023058	Zscan10	98	47.297
MGP_FVBNJ_G0020090	Zkscan4	65	45.200	MGP_FVBNJ_G0023051	Zfp945	92	45.200
MGP_FVBNJ_G0020090	Zkscan4	56	47.773	MGP_FVBNJ_G0033529	Zfp882	85	47.773
MGP_FVBNJ_G0020090	Zkscan4	53	51.908	MGP_FVBNJ_G0021824	Zfp251	73	50.951
MGP_FVBNJ_G0020090	Zkscan4	53	54.444	MGP_FVBNJ_G0031900	Zfp141	62	54.444
MGP_FVBNJ_G0020090	Zkscan4	57	46.718	MGP_FVBNJ_G0031902	Zfp715	71	45.600
MGP_FVBNJ_G0020090	Zkscan4	63	47.552	MGP_FVBNJ_G0031600	Zfp94	75	47.549
MGP_FVBNJ_G0020090	Zkscan4	56	52.381	MGP_FVBNJ_G0031630	Zfp574	61	44.697