EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0020438 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpa0
Alias: 1110055B05Rik|3010025E17Rik|Hnrpa0|hnRNP A0
Full Name: heterogeneous nuclear ribonucleoprotein A0
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 2291 bases
Position: chr13:54635955-54638245
Accession: 1924384
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0037000	RRM_1	PF00076.22	2.9e-31	1	2
MGP_FVBNJ_P0037000	RRM_1	PF00076.22	2.9e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0037000	-	2291	-	MGP_FVBNJ_P0037000	266 (aa)	-	Q9CX86

Gene Model

Click here to download MGP_FVBNJ_G0020438's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0020438's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0020438	Hnrnpa0	74	42.347	MGP_FVBNJ_G0029738	Msi1	57	42.949
MGP_FVBNJ_G0020438	Hnrnpa0	68	41.989	MGP_FVBNJ_G0018747	Msi2	99	41.228
MGP_FVBNJ_G0020438	Hnrnpa0	79	40.698	MGP_FVBNJ_G0017321	Cirbp	97	38.095
MGP_FVBNJ_G0020438	Hnrnpa0	72	33.333	MGP_FVBNJ_G0017327	Dazap1	100	34.615
MGP_FVBNJ_G0020438	Hnrnpa0	92	31.447	MGP_FVBNJ_G0026632	Pabpc1l	56	30.864
MGP_FVBNJ_G0020438	Hnrnpa0	64	34.706	MGP_FVBNJ_G0029554	Hnrnpdl	51	34.706
MGP_FVBNJ_G0020438	Hnrnpa0	72	36.458	MGP_FVBNJ_G0029552	Hnrnpd	100	37.838
MGP_FVBNJ_G0020438	Hnrnpa0	62	35.065	MGP_FVBNJ_G0035499	Rbmx	82	33.333
MGP_FVBNJ_G0020438	Hnrnpa0	67	35.882	MGP_FVBNJ_G0018097	Hnrnpab	57	35.882
MGP_FVBNJ_G0020438	Hnrnpa0	68	60.556	MGP_FVBNJ_G0025662	Hnrnpa3	51	60.894
MGP_FVBNJ_G0020438	Hnrnpa0	59	31.013	MGP_FVBNJ_G0021609	Pabpc1	54	31.013
MGP_FVBNJ_G0020438	Hnrnpa0	73	53.608	MGP_FVBNJ_G0030504	Hnrnpa2b1	59	55.307
MGP_FVBNJ_G0020438	Hnrnpa0	58	43.750	MGP_FVBNJ_G0035297	Rbm3	80	46.053