EuRBPDB

Description

Ensembl ID: MGP_FVBNJ_G0020444 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpk
Alias: Hnrpk|Hnrpk {ECO:0000313|EMBL:AAH89328.1,GN ECO:0000313|MGI:MGI:99894}|KBBP|NOVA|hnRNPK
Full Name: heterogeneous nuclear ribonucleoprotein K
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 12045 bases
Position: chr13:54905214-54917258
Accession: 99894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0037009	KH_1	PF00013.29	2.4e-43	1	3
MGP_FVBNJ_P0037009	KH_1	PF00013.29	2.4e-43	2	3
MGP_FVBNJ_P0037009	KH_1	PF00013.29	2.4e-43	3	3
MGP_FVBNJ_P0037012	KH_1	PF00013.29	2.4e-43	1	3
MGP_FVBNJ_P0037012	KH_1	PF00013.29	2.4e-43	2	3
MGP_FVBNJ_P0037012	KH_1	PF00013.29	2.4e-43	3	3
MGP_FVBNJ_P0037008	KH_1	PF00013.29	3e-43	1	3
MGP_FVBNJ_P0037008	KH_1	PF00013.29	3e-43	2	3
MGP_FVBNJ_P0037008	KH_1	PF00013.29	3e-43	3	3
MGP_FVBNJ_P0037010	KH_1	PF00013.29	3e-43	1	3
MGP_FVBNJ_P0037010	KH_1	PF00013.29	3e-43	2	3
MGP_FVBNJ_P0037010	KH_1	PF00013.29	3e-43	3	3
MGP_FVBNJ_P0037011	KH_1	PF00013.29	2.3e-33	1	2
MGP_FVBNJ_P0037011	KH_1	PF00013.29	2.3e-33	2	2
MGP_FVBNJ_P0037016	KH_1	PF00013.29	1.1e-23	1	2
MGP_FVBNJ_P0037016	KH_1	PF00013.29	1.1e-23	2	2
MGP_FVBNJ_P0037013	KH_1	PF00013.29	1.6e-23	1	2
MGP_FVBNJ_P0037013	KH_1	PF00013.29	1.6e-23	2	2
MGP_FVBNJ_P0037019	KH_1	PF00013.29	2.9e-23	1	2
MGP_FVBNJ_P0037019	KH_1	PF00013.29	2.9e-23	2	2
MGP_FVBNJ_P0037021	KH_1	PF00013.29	3.2e-09	1	1
MGP_FVBNJ_P0037023	KH_1	PF00013.29	6.5e-09	1	1
MGP_FVBNJ_P0037018	KH_1	PF00013.29	3.4e-05	1	1
MGP_FVBNJ_P0037023	KH_2	PF07650.17	0.00011	1	1
MGP_FVBNJ_P0037018	KH_2	PF07650.17	0.00023	1	1
MGP_FVBNJ_P0037018	ROKNT	PF08067.11	2e-27	1	1
MGP_FVBNJ_P0037013	ROKNT	PF08067.11	3e-27	1	1
MGP_FVBNJ_P0037023	ROKNT	PF08067.11	3.6e-27	1	1
MGP_FVBNJ_P0037009	ROKNT	PF08067.11	7.7e-27	1	1
MGP_FVBNJ_P0037012	ROKNT	PF08067.11	7.7e-27	1	1
MGP_FVBNJ_P0037016	ROKNT	PF08067.11	1.9e-26	1	1
MGP_FVBNJ_P0037008	ROKNT	PF08067.11	4e-26	1	1
MGP_FVBNJ_P0037010	ROKNT	PF08067.11	4e-26	1	1
MGP_FVBNJ_P0037019	ROKNT	PF08067.11	1.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0037024	-	780	-	-	- (aa)	-	-
MGP_FVBNJ_T0037015	-	737	-	-	- (aa)	-	-
MGP_FVBNJ_T0037014	-	522	-	-	- (aa)	-	-
MGP_FVBNJ_T0037017	-	459	-	-	- (aa)	-	-
MGP_FVBNJ_T0037016	-	900	-	MGP_FVBNJ_P0037016	256 (aa)	-	-
MGP_FVBNJ_T0037011	-	2488	-	MGP_FVBNJ_P0037011	395 (aa)	-	-
MGP_FVBNJ_T0037010	-	2579	-	MGP_FVBNJ_P0037010	464 (aa)	-	-
MGP_FVBNJ_T0037013	-	1004	-	MGP_FVBNJ_P0037013	299 (aa)	-	-
MGP_FVBNJ_T0037012	-	2556	-	MGP_FVBNJ_P0037012	440 (aa)	-	-
MGP_FVBNJ_T0037020	-	833	-	-	- (aa)	-	-
MGP_FVBNJ_T0037021	-	476	-	MGP_FVBNJ_P0037021	87 (aa)	-	-
MGP_FVBNJ_T0037022	-	775	-	-	- (aa)	-	-
MGP_FVBNJ_T0037023	-	1053	-	MGP_FVBNJ_P0037023	97 (aa)	-	-
MGP_FVBNJ_T0037019	-	676	-	MGP_FVBNJ_P0037019	178 (aa)	-	-
MGP_FVBNJ_T0037018	-	723	-	MGP_FVBNJ_P0037018	77 (aa)	-	-
MGP_FVBNJ_T0037008	-	2813	XM_006517103	MGP_FVBNJ_P0037008	464 (aa)	XP_006517166	P61979
MGP_FVBNJ_T0037009	-	2469	-	MGP_FVBNJ_P0037009	440 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0020444	Hnrnpk	70	51.316	MGP_FVBNJ_G0017220	Pcbp3	79	41.667
MGP_FVBNJ_G0020444	Hnrnpk	78	31.724	MGP_FVBNJ_G0022224	Pcbp2	84	44.444
MGP_FVBNJ_G0020444	Hnrnpk	56	39.062	MGP_FVBNJ_G0019534	Nova1	56	39.062
MGP_FVBNJ_G0020444	Hnrnpk	57	37.681	MGP_FVBNJ_G0031521	Nova2	54	37.681
MGP_FVBNJ_G0020444	Hnrnpk	57	37.681	MGP_FVBNJ_G0031520	-	50	37.681
MGP_FVBNJ_G0020444	Hnrnpk	57	34.615	MGP_FVBNJ_G0027771	Fubp1	53	34.615
MGP_FVBNJ_G0020444	Hnrnpk	93	98.745	MGP_FVBNJ_G0032230	-	98	98.745
MGP_FVBNJ_G0020444	Hnrnpk	78	32.414	MGP_FVBNJ_G0034992	Pcbp4	86	33.728
MGP_FVBNJ_G0020444	Hnrnpk	78	31.724	MGP_FVBNJ_G0030750	Pcbp1	85	42.857