EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0020746 (Gene tree)
Gene ID: -
Gene Symbol: Ddx4
Alias: AV206478|Mvh|VASA|Vasa|mvh / m'vasa
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 56485 bases
Position: chr13:108973279-109029763
Accession: 102670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0037918	DEAD	PF00270.29	4.5e-49	1	1
MGP_FVBNJ_P0037919	DEAD	PF00270.29	4.9e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0037918	-	2770	XM_006517524	MGP_FVBNJ_P0037918	702 (aa)	XP_006517587	Q61496
MGP_FVBNJ_T0037919	-	2848	-	MGP_FVBNJ_P0037919	728 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0020746's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0020746's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0020746	Ddx4	56	34.527	MGP_FVBNJ_G0031183	Ddx47	93	34.015
MGP_FVBNJ_G0020746	Ddx4	57	39.163	MGP_FVBNJ_G0021887	Ddx17	61	39.163
MGP_FVBNJ_G0020746	Ddx4	51	30.709	MGP_FVBNJ_G0033890	Ddx19b	74	30.709
MGP_FVBNJ_G0020746	Ddx4	56	40.000	MGP_FVBNJ_G0034823	Ddx43	60	40.000
MGP_FVBNJ_G0020746	Ddx4	57	39.012	MGP_FVBNJ_G0019136	Ddx5	80	38.922
MGP_FVBNJ_G0020746	Ddx4	57	38.519	MGP_FVBNJ_G0020413	Ddx41	64	38.519
MGP_FVBNJ_G0020746	Ddx4	67	50.513	MGP_FVBNJ_G0035327	Ddx3x	69	51.528
MGP_FVBNJ_G0020746	Ddx4	57	34.314	MGP_FVBNJ_G0018685	Ddx52	66	34.314
MGP_FVBNJ_G0020746	Ddx4	52	34.474	MGP_FVBNJ_G0033461	Ddx49	95	34.454
MGP_FVBNJ_G0020746	Ddx4	53	39.211	MGP_FVBNJ_G0016388	Ddx59	59	39.211
MGP_FVBNJ_G0020746	Ddx4	54	30.326	MGP_FVBNJ_G0034291	Ddx25	80	30.488
MGP_FVBNJ_G0020746	Ddx4	62	52.596	MGP_FVBNJ_G0016758	D1Pas1	71	49.578