EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0021106 (Gene tree)
Gene ID: -
Gene Symbol: Rab2b
Alias: 1500012D09Rik|4930528G15Rik|A230002G14|D530043M21Rik|Rab2B
Full Name: RAB2B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 18348 bases
Position: chr14:44434818-44453165
Accession: 1923588
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0039061	MMR_HSR1	PF01926.23	0.00011	1	1
MGP_FVBNJ_P0039058	MMR_HSR1	PF01926.23	0.00012	1	1
MGP_FVBNJ_P0039059	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0039064	-	475	-	MGP_FVBNJ_P0039064	62 (aa)	-	-
MGP_FVBNJ_T0039065	-	270	-	MGP_FVBNJ_P0039065	44 (aa)	-	-
MGP_FVBNJ_T0039062	-	579	-	-	- (aa)	-	-
MGP_FVBNJ_T0039063	-	607	-	MGP_FVBNJ_P0039063	71 (aa)	-	-
MGP_FVBNJ_T0039060	-	3577	-	-	- (aa)	-	-
MGP_FVBNJ_T0039061	-	2620	-	MGP_FVBNJ_P0039061	193 (aa)	-	-
MGP_FVBNJ_T0039059	-	1573	-	MGP_FVBNJ_P0039059	216 (aa)	-	-
MGP_FVBNJ_T0039058	-	2907	-	MGP_FVBNJ_P0039058	216 (aa)	-	P59279

Gene Model

Click here to download MGP_FVBNJ_G0021106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0021106's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0021106	Rab2b	95	51.366	MGP_FVBNJ_G0034698	Rab11a	91	56.115
MGP_FVBNJ_G0021106	Rab2b	81	48.718	MGP_FVBNJ_G0032289	Rab30	84	45.614
MGP_FVBNJ_G0021106	Rab2b	90	40.206	MGP_FVBNJ_G0018989	Rab5c	89	40.206
MGP_FVBNJ_G0021106	Rab2b	97	44.041	MGP_FVBNJ_G0019195	Rab37	89	44.041
MGP_FVBNJ_G0021106	Rab2b	81	52.229	MGP_FVBNJ_G0024493	Rab1b	86	50.000
MGP_FVBNJ_G0021106	Rab2b	86	47.872	MGP_FVBNJ_G0023927	Rab18	89	47.872
MGP_FVBNJ_G0021106	Rab2b	87	62.032	MGP_FVBNJ_G0025457	Rab14	93	67.857
MGP_FVBNJ_G0021106	Rab2b	86	40.323	MGP_FVBNJ_G0026758	Rab22a	94	40.323
MGP_FVBNJ_G0021106	Rab2b	81	39.752	MGP_FVBNJ_G0035852	Rab9b	84	37.870
MGP_FVBNJ_G0021106	Rab2b	76	41.216	MGP_FVBNJ_G0035444	Rab33a	69	39.634
MGP_FVBNJ_G0021106	Rab2b	78	35.714	MGP_FVBNJ_G0018590	Rab34	62	35.000
MGP_FVBNJ_G0021106	Rab2b	79	43.421	MGP_FVBNJ_G0032349	Rab6a	77	40.828
MGP_FVBNJ_G0021106	Rab2b	79	44.079	MGP_FVBNJ_G0023683	Rab5a	78	41.916
MGP_FVBNJ_G0021106	Rab2b	99	42.079	MGP_FVBNJ_G0027195	Rab25	95	42.079
MGP_FVBNJ_G0021106	Rab2b	80	47.097	MGP_FVBNJ_G0023781	Rab12	69	39.500
MGP_FVBNJ_G0021106	Rab2b	77	34.839	MGP_FVBNJ_G0029129	Rheb	92	34.104
MGP_FVBNJ_G0021106	Rab2b	87	31.250	MGP_FVBNJ_G0022049	Rabl2	84	31.250
MGP_FVBNJ_G0021106	Rab2b	79	38.710	MGP_FVBNJ_G0017181	Rab36	61	37.654
MGP_FVBNJ_G0021106	Rab2b	85	40.761	MGP_FVBNJ_G0017710	Rab5b	86	40.761
MGP_FVBNJ_G0021106	Rab2b	100	83.796	MGP_FVBNJ_G0027821	Rab2a	100	83.796
MGP_FVBNJ_G0021106	Rab2b	73	35.211	MGP_FVBNJ_G0027476	Nras	97	36.054
MGP_FVBNJ_G0021106	Rab2b	73	33.803	MGP_FVBNJ_G0034931	Mras	81	32.544
MGP_FVBNJ_G0021106	Rab2b	79	32.026	MGP_FVBNJ_G0031358	Rasl2-9	73	30.864
MGP_FVBNJ_G0021106	Rab2b	73	36.620	MGP_FVBNJ_G0031251	Kras	85	36.420
MGP_FVBNJ_G0021106	Rab2b	86	39.474	MGP_FVBNJ_G0026992	Rab33b	82	39.474
MGP_FVBNJ_G0021106	Rab2b	79	34.568	MGP_FVBNJ_G0030152	Rasl11a	72	30.857
MGP_FVBNJ_G0021106	Rab2b	90	36.816	MGP_FVBNJ_G0034954	Rab6b	93	36.816
MGP_FVBNJ_G0021106	Rab2b	73	35.211	MGP_FVBNJ_G0032988	Hras	85	35.185
MGP_FVBNJ_G0021106	Rab2b	80	39.130	MGP_FVBNJ_G0036009	Rab9	83	37.870
MGP_FVBNJ_G0021106	Rab2b	99	48.387	MGP_FVBNJ_G0023335	Rab11b	93	56.522
MGP_FVBNJ_G0021106	Rab2b	91	39.205	MGP_FVBNJ_G0023772	Rab31	97	38.144
MGP_FVBNJ_G0021106	Rab2b	78	32.692	MGP_FVBNJ_G0019385	Dnajc27	58	32.278
MGP_FVBNJ_G0021106	Rab2b	92	46.465	MGP_FVBNJ_G0017895	Rab1a	97	46.465
MGP_FVBNJ_G0021106	Rab2b	59	31.034	MGP_FVBNJ_G0019032	Arl4d	57	31.034
MGP_FVBNJ_G0021106	Rab2b	81	45.860	MGP_FVBNJ_G0019682	Rab15	83	43.182
MGP_FVBNJ_G0021106	Rab2b	90	45.408	MGP_FVBNJ_G0035613	Rab39b	92	45.408