EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0021786 (Gene tree)
Gene ID: -
Gene Symbol: Puf60
Alias: 2410104I19Rik|2810454F19Rik|SIAHBP1
Full Name: poly-U binding splicing factor 60
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 10763 bases
Position: chr15:71935734-71946496
Accession: 1915209
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0041064	RRM_1	PF00076.22	5e-44	1	2
MGP_FVBNJ_P0041064	RRM_1	PF00076.22	5e-44	2	2
MGP_FVBNJ_P0041065	RRM_1	PF00076.22	5.8e-44	1	2
MGP_FVBNJ_P0041065	RRM_1	PF00076.22	5.8e-44	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0041065	-	1912	-	MGP_FVBNJ_P0041065	564 (aa)	-	-
MGP_FVBNJ_T0041064	-	1861	XM_006521302	MGP_FVBNJ_P0041064	547 (aa)	XP_006521365	Q3UEB3

Gene Model

Click here to download MGP_FVBNJ_G0021786's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0021786's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0021786	Puf60	59	34.314	MGP_FVBNJ_G0031355	U2af2	61	36.275
MGP_FVBNJ_G0021786	Puf60	81	32.407	MGP_FVBNJ_G0017395	Celf5	57	32.407