EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0022113 (Gene tree)
Gene ID: -
Gene Symbol: Ddx23
Alias: 3110082M05Rik|4921506D17Rik
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 21209 bases
Position: chr15:94849798-94871006
Accession: 1921601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0042191	DEAD	PF00270.29	2.3e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0042194	-	793	-	-	- (aa)	-	-
MGP_FVBNJ_T0042195	-	321	-	MGP_FVBNJ_P0042195	80 (aa)	-	-
MGP_FVBNJ_T0042196	-	610	-	-	- (aa)	-	-
MGP_FVBNJ_T0042191	-	3171	XM_006521493	MGP_FVBNJ_P0042191	819 (aa)	XP_006521556	D3Z0M9
MGP_FVBNJ_T0042192	-	3093	-	-	- (aa)	-	-
MGP_FVBNJ_T0042193	-	3411	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0022113's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0022113's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0022113	Ddx23	50	37.915	MGP_FVBNJ_G0019136	Ddx5	81	36.389
MGP_FVBNJ_G0022113	Ddx23	51	39.110	MGP_FVBNJ_G0021887	Ddx17	60	39.110
MGP_FVBNJ_G0022113	Ddx23	52	35.417	MGP_FVBNJ_G0016388	Ddx59	64	35.417
MGP_FVBNJ_G0022113	Ddx23	52	40.139	MGP_FVBNJ_G0020413	Ddx41	75	37.400
MGP_FVBNJ_G0022113	Ddx23	52	37.868	MGP_FVBNJ_G0035327	Ddx3x	63	37.753
MGP_FVBNJ_G0022113	Ddx23	54	40.757	MGP_FVBNJ_G0034823	Ddx43	63	40.757
MGP_FVBNJ_G0022113	Ddx23	50	30.900	MGP_FVBNJ_G0022488	Eif4a2	92	30.900
MGP_FVBNJ_G0022113	Ddx23	53	38.063	MGP_FVBNJ_G0016758	D1Pas1	63	38.063
MGP_FVBNJ_G0022113	Ddx23	54	30.243	MGP_FVBNJ_G0018685	Ddx52	70	30.222