EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0022272 (Gene tree)
Gene ID: -
Gene Symbol: Srl
Alias: 9830004M20Rik|AW108387|Sar|sar|sarcalumenin
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 64471 bases
Position: chr16:894877-959347
Accession: 2146620
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0042674	MMR_HSR1	PF01926.23	2.1e-08	1	1
MGP_FVBNJ_P0042675	MMR_HSR1	PF01926.23	7.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0042675	-	5000	-	MGP_FVBNJ_P0042675	910 (aa)	-	-
MGP_FVBNJ_T0042674	-	3698	XM_006521687	MGP_FVBNJ_P0042674	472 (aa)	XP_006521750	Q7TQ48
MGP_FVBNJ_T0042677	-	349	-	-	- (aa)	-	-
MGP_FVBNJ_T0042676	-	366	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0022272's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0022272's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0022272	Srl	84	31.738	MGP_FVBNJ_G0026157	Ehd4	71	31.738
MGP_FVBNJ_G0022272	Srl	77	33.973	MGP_FVBNJ_G0024556	Ehd1	67	33.973
MGP_FVBNJ_G0022272	Srl	82	33.162	MGP_FVBNJ_G0031467	Ehd2	97	47.059
MGP_FVBNJ_G0022272	Srl	79	32.440	MGP_FVBNJ_G0023814	Ehd3	73	32.506