EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0022535 (Gene tree)
Gene ID: -
Gene Symbol: Ncbp2
Alias: 20kDa|5930413E18Rik|AA536802|AI843301|C79367|Cbp20
Full Name: nuclear cap binding protein subunit 2
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 13992 bases
Position: chr16:28410432-28424423
Accession: 1915342
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0043764	RRM_1	PF00076.22	1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0043764	-	2070	-	MGP_FVBNJ_P0043764	156 (aa)	-	Q9CQ49
MGP_FVBNJ_T0043765	-	762	-	-	- (aa)	-	-
MGP_FVBNJ_T0043766	-	574	-	-	- (aa)	-	-
MGP_FVBNJ_T0043767	-	515	-	MGP_FVBNJ_P0043767	103 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0022535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0022535's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0022535	Ncbp2	78	33.607	MGP_FVBNJ_G0029931	Eif4h	56	31.690
MGP_FVBNJ_G0022535	Ncbp2	54	36.471	MGP_FVBNJ_G0017321	Cirbp	85	38.043
MGP_FVBNJ_G0022535	Ncbp2	71	33.333	MGP_FVBNJ_G0032858	Tial1	62	32.184
MGP_FVBNJ_G0022535	Ncbp2	53	32.941	MGP_FVBNJ_G0035499	Rbmx	83	32.941
MGP_FVBNJ_G0022535	Ncbp2	51	36.000	MGP_FVBNJ_G0030747	Tia1	78	36.000