EuRBPDB

Description

Ensembl ID: MGP_FVBNJ_G0022635 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb20
Alias: 1300017A20Rik|7330412A13Rik|A930017C21Rik|D16Wsu73e|DPZF|HOF|ODA-8S|Oda8|Zfp288
Full Name: zinc finger and BTB domain containing 20
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 733443 bases
Position: chr16:39397534-40130976
Accession: 1929213
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0044176	zf-C2H2	PF00096.26	4.4e-22	1	5
MGP_FVBNJ_P0044176	zf-C2H2	PF00096.26	4.4e-22	2	5
MGP_FVBNJ_P0044176	zf-C2H2	PF00096.26	4.4e-22	3	5
MGP_FVBNJ_P0044176	zf-C2H2	PF00096.26	4.4e-22	4	5
MGP_FVBNJ_P0044176	zf-C2H2	PF00096.26	4.4e-22	5	5
MGP_FVBNJ_P0044176	zf-met	PF12874.7	6.4e-07	1	2
MGP_FVBNJ_P0044176	zf-met	PF12874.7	6.4e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0044170	-	590	-	MGP_FVBNJ_P0044170	60 (aa)	-	-
MGP_FVBNJ_T0044176	-	2226	-	MGP_FVBNJ_P0044176	741 (aa)	-	-
MGP_FVBNJ_T0044173	-	837	-	MGP_FVBNJ_P0044173	138 (aa)	-	-
MGP_FVBNJ_T0044171	-	463	-	MGP_FVBNJ_P0044171	3 (aa)	-	-
MGP_FVBNJ_T0044172	-	439	-	MGP_FVBNJ_P0044172	3 (aa)	-	-
MGP_FVBNJ_T0044167	-	414	-	-	- (aa)	-	-
MGP_FVBNJ_T0044166	-	645	-	-	- (aa)	-	-
MGP_FVBNJ_T0044165	-	821	-	MGP_FVBNJ_P0044165	75 (aa)	-	-
MGP_FVBNJ_T0044164	-	593	-	-	- (aa)	-	-
MGP_FVBNJ_T0044163	-	754	-	MGP_FVBNJ_P0044163	63 (aa)	-	-
MGP_FVBNJ_T0044162	-	418	-	-	- (aa)	-	-
MGP_FVBNJ_T0044161	-	425	-	-	- (aa)	-	-
MGP_FVBNJ_T0044160	-	563	-	-	- (aa)	-	-
MGP_FVBNJ_T0044174	-	736	-	-	- (aa)	-	-
MGP_FVBNJ_T0044175	-	267	-	-	- (aa)	-	-
MGP_FVBNJ_T0044169	-	787	-	MGP_FVBNJ_P0044169	131 (aa)	-	-
MGP_FVBNJ_T0044168	-	2066	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0022635	Zbtb20	61	38.739	MGP_FVBNJ_G0018411	Bcl6b	82	38.739