EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0045231	PABP	PF00658.18	1.4e-26	1	1
MGP_FVBNJ_P0045231	RRM_5	PF13893.6	4.3e-07	1	1
MGP_FVBNJ_P0045231	RRM_1	PF00076.22	1.9e-89	1	4
MGP_FVBNJ_P0045231	RRM_1	PF00076.22	1.9e-89	2	4
MGP_FVBNJ_P0045231	RRM_1	PF00076.22	1.9e-89	3	4
MGP_FVBNJ_P0045231	RRM_1	PF00076.22	1.9e-89	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0045231	-	3208	-	MGP_FVBNJ_P0045231	643 (aa)	-	Q9D4E6

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0022945	Pabpc6	59	34.091	MGP_FVBNJ_G0035158	Rbms3	77	33.708
MGP_FVBNJ_G0022945	Pabpc6	64	39.062	MGP_FVBNJ_G0034657	Celf6	77	39.062
MGP_FVBNJ_G0022945	Pabpc6	58	38.798	MGP_FVBNJ_G0027397	Sf3b4	50	38.798
MGP_FVBNJ_G0022945	Pabpc6	72	36.585	MGP_FVBNJ_G0027344	Celf3	80	37.500
MGP_FVBNJ_G0022945	Pabpc6	99	76.471	MGP_FVBNJ_G0021609	Pabpc1	99	76.724
MGP_FVBNJ_G0022945	Pabpc6	99	70.186	MGP_FVBNJ_G0024168	Pabpc2	99	69.876
MGP_FVBNJ_G0022945	Pabpc6	98	64.796	MGP_FVBNJ_G0026836	-	99	64.796
MGP_FVBNJ_G0022945	Pabpc6	60	37.349	MGP_FVBNJ_G0028225	Elavl2	90	37.349
MGP_FVBNJ_G0022945	Pabpc6	61	36.145	MGP_FVBNJ_G0034229	Elavl3	92	36.145
MGP_FVBNJ_G0022945	Pabpc6	59	58.470	MGP_FVBNJ_G0035793	Pabpc5	95	58.445
MGP_FVBNJ_G0022945	Pabpc6	53	35.526	MGP_FVBNJ_G0025935	Celf1	52	35.526
MGP_FVBNJ_G0022945	Pabpc6	51	34.211	MGP_FVBNJ_G0025138	Celf2	57	34.211
MGP_FVBNJ_G0022945	Pabpc6	99	65.120	MGP_FVBNJ_G0028517	Pabpc4	100	86.232
MGP_FVBNJ_G0022945	Pabpc6	57	34.667	MGP_FVBNJ_G0029769	Rbm19	70	34.667
MGP_FVBNJ_G0022945	Pabpc6	58	64.497	MGP_FVBNJ_G0026984	Pabpc4l	98	64.497
MGP_FVBNJ_G0022945	Pabpc6	56	34.014	MGP_FVBNJ_G0032858	Tial1	94	31.783
MGP_FVBNJ_G0022945	Pabpc6	60	32.468	MGP_FVBNJ_G0028357	Elavl4	88	32.468
MGP_FVBNJ_G0022945	Pabpc6	58	36.905	MGP_FVBNJ_G0030747	Tia1	96	36.905
MGP_FVBNJ_G0022945	Pabpc6	97	56.625	MGP_FVBNJ_G0026632	Pabpc1l	99	56.467
MGP_FVBNJ_G0022945	Pabpc6	62	36.842	MGP_FVBNJ_G0024008	Celf4	62	36.842