EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0023058 (Gene tree)
Gene ID: -
Gene Symbol: Zscan10
Alias: BC068284|Zfp206|Zkscan10|Znf206|Zscan10
Full Name: zinc finger and SCAN domain containing 10
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 9843 bases
Position: chr17:21215739-21225581
Accession: 3040700
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0045496	zf-C2H2	PF00096.26	4.4e-68	1	12
MGP_FVBNJ_P0045496	zf-C2H2	PF00096.26	4.4e-68	2	12
MGP_FVBNJ_P0045496	zf-C2H2	PF00096.26	4.4e-68	3	12
MGP_FVBNJ_P0045496	zf-C2H2	PF00096.26	4.4e-68	4	12
MGP_FVBNJ_P0045496	zf-C2H2	PF00096.26	4.4e-68	5	12
MGP_FVBNJ_P0045496	zf-C2H2	PF00096.26	4.4e-68	6	12
MGP_FVBNJ_P0045496	zf-C2H2	PF00096.26	4.4e-68	7	12
MGP_FVBNJ_P0045496	zf-C2H2	PF00096.26	4.4e-68	8	12
MGP_FVBNJ_P0045496	zf-C2H2	PF00096.26	4.4e-68	9	12
MGP_FVBNJ_P0045496	zf-C2H2	PF00096.26	4.4e-68	10	12
MGP_FVBNJ_P0045496	zf-C2H2	PF00096.26	4.4e-68	11	12
MGP_FVBNJ_P0045496	zf-C2H2	PF00096.26	4.4e-68	12	12
MGP_FVBNJ_P0045497	zf-C2H2	PF00096.26	5.1e-67	1	12
MGP_FVBNJ_P0045497	zf-C2H2	PF00096.26	5.1e-67	2	12
MGP_FVBNJ_P0045497	zf-C2H2	PF00096.26	5.1e-67	3	12
MGP_FVBNJ_P0045497	zf-C2H2	PF00096.26	5.1e-67	4	12
MGP_FVBNJ_P0045497	zf-C2H2	PF00096.26	5.1e-67	5	12
MGP_FVBNJ_P0045497	zf-C2H2	PF00096.26	5.1e-67	6	12
MGP_FVBNJ_P0045497	zf-C2H2	PF00096.26	5.1e-67	7	12
MGP_FVBNJ_P0045497	zf-C2H2	PF00096.26	5.1e-67	8	12
MGP_FVBNJ_P0045497	zf-C2H2	PF00096.26	5.1e-67	9	12
MGP_FVBNJ_P0045497	zf-C2H2	PF00096.26	5.1e-67	10	12
MGP_FVBNJ_P0045497	zf-C2H2	PF00096.26	5.1e-67	11	12
MGP_FVBNJ_P0045497	zf-C2H2	PF00096.26	5.1e-67	12	12
MGP_FVBNJ_P0045500	zf-C2H2	PF00096.26	4.8e-66	1	12
MGP_FVBNJ_P0045500	zf-C2H2	PF00096.26	4.8e-66	2	12
MGP_FVBNJ_P0045500	zf-C2H2	PF00096.26	4.8e-66	3	12
MGP_FVBNJ_P0045500	zf-C2H2	PF00096.26	4.8e-66	4	12
MGP_FVBNJ_P0045500	zf-C2H2	PF00096.26	4.8e-66	5	12
MGP_FVBNJ_P0045500	zf-C2H2	PF00096.26	4.8e-66	6	12
MGP_FVBNJ_P0045500	zf-C2H2	PF00096.26	4.8e-66	7	12
MGP_FVBNJ_P0045500	zf-C2H2	PF00096.26	4.8e-66	8	12
MGP_FVBNJ_P0045500	zf-C2H2	PF00096.26	4.8e-66	9	12
MGP_FVBNJ_P0045500	zf-C2H2	PF00096.26	4.8e-66	10	12
MGP_FVBNJ_P0045500	zf-C2H2	PF00096.26	4.8e-66	11	12
MGP_FVBNJ_P0045500	zf-C2H2	PF00096.26	4.8e-66	12	12
MGP_FVBNJ_P0045499	zf-C2H2	PF00096.26	2e-64	1	12
MGP_FVBNJ_P0045499	zf-C2H2	PF00096.26	2e-64	2	12
MGP_FVBNJ_P0045499	zf-C2H2	PF00096.26	2e-64	3	12
MGP_FVBNJ_P0045499	zf-C2H2	PF00096.26	2e-64	4	12
MGP_FVBNJ_P0045499	zf-C2H2	PF00096.26	2e-64	5	12
MGP_FVBNJ_P0045499	zf-C2H2	PF00096.26	2e-64	6	12
MGP_FVBNJ_P0045499	zf-C2H2	PF00096.26	2e-64	7	12
MGP_FVBNJ_P0045499	zf-C2H2	PF00096.26	2e-64	8	12
MGP_FVBNJ_P0045499	zf-C2H2	PF00096.26	2e-64	9	12
MGP_FVBNJ_P0045499	zf-C2H2	PF00096.26	2e-64	10	12
MGP_FVBNJ_P0045499	zf-C2H2	PF00096.26	2e-64	11	12
MGP_FVBNJ_P0045499	zf-C2H2	PF00096.26	2e-64	12	12
MGP_FVBNJ_P0045498	zf-C2H2	PF00096.26	5.3e-64	1	12
MGP_FVBNJ_P0045498	zf-C2H2	PF00096.26	5.3e-64	2	12
MGP_FVBNJ_P0045498	zf-C2H2	PF00096.26	5.3e-64	3	12
MGP_FVBNJ_P0045498	zf-C2H2	PF00096.26	5.3e-64	4	12
MGP_FVBNJ_P0045498	zf-C2H2	PF00096.26	5.3e-64	5	12
MGP_FVBNJ_P0045498	zf-C2H2	PF00096.26	5.3e-64	6	12
MGP_FVBNJ_P0045498	zf-C2H2	PF00096.26	5.3e-64	7	12
MGP_FVBNJ_P0045498	zf-C2H2	PF00096.26	5.3e-64	8	12
MGP_FVBNJ_P0045498	zf-C2H2	PF00096.26	5.3e-64	9	12
MGP_FVBNJ_P0045498	zf-C2H2	PF00096.26	5.3e-64	10	12
MGP_FVBNJ_P0045498	zf-C2H2	PF00096.26	5.3e-64	11	12
MGP_FVBNJ_P0045498	zf-C2H2	PF00096.26	5.3e-64	12	12
MGP_FVBNJ_P0045501	zf-C2H2	PF00096.26	1.6e-08	1	2
MGP_FVBNJ_P0045501	zf-C2H2	PF00096.26	1.6e-08	2	2
MGP_FVBNJ_P0045500	zf-met	PF12874.7	3.8e-07	1	1
MGP_FVBNJ_P0045499	zf-met	PF12874.7	1.1e-05	1	1
MGP_FVBNJ_P0045498	zf-met	PF12874.7	2.2e-05	1	1
MGP_FVBNJ_P0045496	zf-met	PF12874.7	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0045502	-	531	-	-	- (aa)	-	-
MGP_FVBNJ_T0045503	-	891	-	MGP_FVBNJ_P0045503	149 (aa)	-	-
MGP_FVBNJ_T0045500	-	1902	-	MGP_FVBNJ_P0045500	543 (aa)	-	-
MGP_FVBNJ_T0045501	-	1074	-	MGP_FVBNJ_P0045501	329 (aa)	-	-
MGP_FVBNJ_T0045506	-	844	-	MGP_FVBNJ_P0045506	262 (aa)	-	-
MGP_FVBNJ_T0045507	-	548	-	-	- (aa)	-	-
MGP_FVBNJ_T0045504	-	909	-	MGP_FVBNJ_P0045504	190 (aa)	-	-
MGP_FVBNJ_T0045505	-	1006	-	MGP_FVBNJ_P0045505	190 (aa)	-	-
MGP_FVBNJ_T0045496	-	2368	XM_011246504	MGP_FVBNJ_P0045496	672 (aa)	XP_011244806	Q3URR7
MGP_FVBNJ_T0045497	-	2698	-	MGP_FVBNJ_P0045497	782 (aa)	-	-
MGP_FVBNJ_T0045498	-	2609	-	MGP_FVBNJ_P0045498	750 (aa)	-	-
MGP_FVBNJ_T0045499	-	2271	-	MGP_FVBNJ_P0045499	702 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0023058's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0023058's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0023058	Zscan10	83	46.053	MGP_FVBNJ_G0033900	Zfp1	79	46.460
MGP_FVBNJ_G0023058	Zscan10	75	37.965	MGP_FVBNJ_G0023028	Zfp677	90	37.965
MGP_FVBNJ_G0023058	Zscan10	76	41.339	MGP_FVBNJ_G0026691	Zfp334	67	40.000
MGP_FVBNJ_G0023058	Zscan10	77	37.696	MGP_FVBNJ_G0018810	Zfp652	59	37.696
MGP_FVBNJ_G0023058	Zscan10	78	46.983	MGP_FVBNJ_G0031599	Zfp61	56	46.983
MGP_FVBNJ_G0023058	Zscan10	77	40.146	MGP_FVBNJ_G0031592	Zfp112	56	44.978
MGP_FVBNJ_G0023058	Zscan10	79	47.009	MGP_FVBNJ_G0031593	Zfp235	61	41.880
MGP_FVBNJ_G0023058	Zscan10	78	38.046	MGP_FVBNJ_G0031595	Zfp111	69	42.609
MGP_FVBNJ_G0023058	Zscan10	78	39.344	MGP_FVBNJ_G0031597	Zfp108	65	38.741
MGP_FVBNJ_G0023058	Zscan10	79	34.332	MGP_FVBNJ_G0033529	Zfp882	85	35.160
MGP_FVBNJ_G0023058	Zscan10	77	42.771	MGP_FVBNJ_G0029613	Gfi1	100	42.857
MGP_FVBNJ_G0023058	Zscan10	75	44.554	MGP_FVBNJ_G0018082	Zfp454	70	41.854
MGP_FVBNJ_G0023058	Zscan10	76	32.797	MGP_FVBNJ_G0016399	Zbtb41	53	32.797
MGP_FVBNJ_G0023058	Zscan10	86	32.915	MGP_FVBNJ_G0031630	Zfp574	93	33.902
MGP_FVBNJ_G0023058	Zscan10	89	47.953	MGP_FVBNJ_G0029280	Zbtb49	62	50.704
MGP_FVBNJ_G0023058	Zscan10	78	48.560	MGP_FVBNJ_G0031594	Zfp114	50	48.560
MGP_FVBNJ_G0023058	Zscan10	75	47.667	MGP_FVBNJ_G0021824	Zfp251	67	47.667
MGP_FVBNJ_G0023058	Zscan10	78	34.906	MGP_FVBNJ_G0030470	Repin1	92	36.705
MGP_FVBNJ_G0023058	Zscan10	98	47.297	MGP_FVBNJ_G0020090	Zkscan4	95	42.197
MGP_FVBNJ_G0023058	Zscan10	78	40.179	MGP_FVBNJ_G0031768	Zfp420	97	41.080
MGP_FVBNJ_G0023058	Zscan10	74	37.631	MGP_FVBNJ_G0018176	Zfp672	100	42.857
MGP_FVBNJ_G0023058	Zscan10	81	41.509	MGP_FVBNJ_G0026260	Zfp661	63	44.082
MGP_FVBNJ_G0023058	Zscan10	80	37.160	MGP_FVBNJ_G0018226	Zfp867	83	37.160
MGP_FVBNJ_G0023058	Zscan10	98	45.525	MGP_FVBNJ_G0020510	Rslcan18	84	45.525
MGP_FVBNJ_G0023058	Zscan10	87	33.081	MGP_FVBNJ_G0020511	Zfp759	99	33.991
MGP_FVBNJ_G0023058	Zscan10	79	39.255	MGP_FVBNJ_G0034174	Zfp26	78	39.024
MGP_FVBNJ_G0023058	Zscan10	78	43.254	MGP_FVBNJ_G0032811	E430018J23Rik	79	43.254
MGP_FVBNJ_G0023058	Zscan10	75	35.128	MGP_FVBNJ_G0033745	Zfp319	93	34.081
MGP_FVBNJ_G0023058	Zscan10	99	37.143	MGP_FVBNJ_G0024402	Zfp236	76	37.143
MGP_FVBNJ_G0023058	Zscan10	80	42.342	MGP_FVBNJ_G0031891	-	78	42.342
MGP_FVBNJ_G0023058	Zscan10	83	50.862	MGP_FVBNJ_G0030950	Zfp637	82	50.442
MGP_FVBNJ_G0023058	Zscan10	77	40.456	MGP_FVBNJ_G0031600	Zfp94	70	44.402
MGP_FVBNJ_G0023058	Zscan10	76	45.914	MGP_FVBNJ_G0032808	Zfp768	51	44.944
MGP_FVBNJ_G0023058	Zscan10	90	36.161	MGP_FVBNJ_G0031902	Zfp715	68	36.667
MGP_FVBNJ_G0023058	Zscan10	85	38.060	MGP_FVBNJ_G0023030	Zfp51	89	42.194
MGP_FVBNJ_G0023058	Zscan10	76	37.107	MGP_FVBNJ_G0026729	Zfp64	86	33.913
MGP_FVBNJ_G0023058	Zscan10	74	41.818	MGP_FVBNJ_G0031349	-	73	30.796
MGP_FVBNJ_G0023058	Zscan10	86	31.579	MGP_FVBNJ_G0031348	Zfp865	82	31.579
MGP_FVBNJ_G0023058	Zscan10	76	46.199	MGP_FVBNJ_G0031340	Zfp628	63	46.199
MGP_FVBNJ_G0023058	Zscan10	78	43.165	MGP_FVBNJ_G0028827	Zbtb17	77	34.615
MGP_FVBNJ_G0023058	Zscan10	88	44.915	MGP_FVBNJ_G0030604	Prdm5	90	35.235
MGP_FVBNJ_G0023058	Zscan10	78	37.313	MGP_FVBNJ_G0023051	Zfp945	79	37.313