EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0023116 (Gene tree)
Gene ID: -
Gene Symbol: Tbl3
Alias: 9430070M15Rik
Full Name: transducin (beta)-like 3
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 9663 bases
Position: chr17:22375007-22384669
Accession: 2384863
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0045701	Utp13	PF08625.11	5.3e-39	1	1
MGP_FVBNJ_P0045702	Utp13	PF08625.11	5.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0045701	-	2388	-	MGP_FVBNJ_P0045701	795 (aa)	-	Q8C4J7
MGP_FVBNJ_T0045702	-	896	-	MGP_FVBNJ_P0045702	298 (aa)	-	-
MGP_FVBNJ_T0045703	-	611	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0023116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0023116's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0023116	Tbl3	66	33.673	MGP_FVBNJ_G0028132	Prpf4	56	33.673
MGP_FVBNJ_G0023116	Tbl3	55	33.121	MGP_FVBNJ_G0034584	Wdr61	63	33.121
MGP_FVBNJ_G0023116	Tbl3	71	31.452	MGP_FVBNJ_G0025322	Wdr5	99	31.452
MGP_FVBNJ_G0023116	Tbl3	55	30.714	MGP_FVBNJ_G0026250	Ciao1	84	32.331
MGP_FVBNJ_G0023116	Tbl3	71	32.000	MGP_FVBNJ_G0022586	Wdr5b	92	32.000