EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0023333 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpm
Alias: 2610023M21Rik|AA409009|Hnrpm|mKIAA4193
Full Name: heterogeneous nuclear ribonucleoprotein M
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 40930 bases
Position: chr17:31654333-31695262
Accession: 1926465
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0046591	HnRNP_M	PF11532.8	1.5e-18	1	1
MGP_FVBNJ_P0046590	HnRNP_M	PF11532.8	1.7e-18	1	1
MGP_FVBNJ_P0046593	HnRNP_M	PF11532.8	1.7e-18	1	1
MGP_FVBNJ_P0046589	HnRNP_M	PF11532.8	1.8e-18	1	1
MGP_FVBNJ_P0046593	RRM_1	PF00076.22	7.1e-53	1	3
MGP_FVBNJ_P0046593	RRM_1	PF00076.22	7.1e-53	2	3
MGP_FVBNJ_P0046593	RRM_1	PF00076.22	7.1e-53	3	3
MGP_FVBNJ_P0046589	RRM_1	PF00076.22	8.7e-53	1	3
MGP_FVBNJ_P0046589	RRM_1	PF00076.22	8.7e-53	2	3
MGP_FVBNJ_P0046589	RRM_1	PF00076.22	8.7e-53	3	3
MGP_FVBNJ_P0046591	RRM_1	PF00076.22	1.3e-37	1	2
MGP_FVBNJ_P0046591	RRM_1	PF00076.22	1.3e-37	2	2
MGP_FVBNJ_P0046590	RRM_1	PF00076.22	1.7e-37	1	2
MGP_FVBNJ_P0046590	RRM_1	PF00076.22	1.7e-37	2	2
MGP_FVBNJ_P0046594	RRM_1	PF00076.22	9.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0046589	-	3935	-	MGP_FVBNJ_P0046589	729 (aa)	-	Q9D0E1
MGP_FVBNJ_T0046594	-	729	-	MGP_FVBNJ_P0046594	242 (aa)	-	-
MGP_FVBNJ_T0046595	-	746	-	-	- (aa)	-	-
MGP_FVBNJ_T0046596	-	636	-	-	- (aa)	-	-
MGP_FVBNJ_T0046590	-	2550	-	MGP_FVBNJ_P0046590	679 (aa)	-	-
MGP_FVBNJ_T0046591	-	2428	-	MGP_FVBNJ_P0046591	640 (aa)	-	-
MGP_FVBNJ_T0046592	-	634	-	MGP_FVBNJ_P0046592	56 (aa)	-	-
MGP_FVBNJ_T0046593	-	2339	-	MGP_FVBNJ_P0046593	690 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0023333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0023333's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0023333	Hnrnpm	97	59.322	MGP_FVBNJ_G0026220	Myef2	99	52.088
MGP_FVBNJ_G0023333	Hnrnpm	71	57.065	MGP_FVBNJ_G0026221	-	74	52.349