EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0023335 (Gene tree)
Gene ID: -
Gene Symbol: Rab11b
Alias: A730055L17Rik|RAB11B|Rab11BGN
Full Name: RAB11B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 15279 bases
Position: chr17:31759894-31775172
Accession: 99425
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0046606	MMR_HSR1	PF01926.23	5.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0046608	-	763	-	MGP_FVBNJ_P0046608	149 (aa)	-	-
MGP_FVBNJ_T0046609	-	503	-	-	- (aa)	-	-
MGP_FVBNJ_T0046606	-	1646	XM_011246326	MGP_FVBNJ_P0046606	218 (aa)	XP_006523950	P46638
MGP_FVBNJ_T0046607	-	1546	-	MGP_FVBNJ_P0046607	193 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0023335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0023335's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0023335	Rab11b	80	31.746	MGP_FVBNJ_G0019521	Arl4a	60	31.746
MGP_FVBNJ_G0023335	Rab11b	90	40.580	MGP_FVBNJ_G0036009	Rab9	87	40.110
MGP_FVBNJ_G0023335	Rab11b	78	41.026	MGP_FVBNJ_G0018590	Rab34	70	33.880
MGP_FVBNJ_G0023335	Rab11b	91	37.778	MGP_FVBNJ_G0032349	Rab6a	75	38.217
MGP_FVBNJ_G0023335	Rab11b	91	36.296	MGP_FVBNJ_G0034954	Rab6b	77	35.404
MGP_FVBNJ_G0023335	Rab11b	97	71.034	MGP_FVBNJ_G0027195	Rab25	100	61.435
MGP_FVBNJ_G0023335	Rab11b	90	41.912	MGP_FVBNJ_G0035444	Rab33a	75	40.331
MGP_FVBNJ_G0023335	Rab11b	91	44.118	MGP_FVBNJ_G0019195	Rab37	77	44.578
MGP_FVBNJ_G0023335	Rab11b	81	34.711	MGP_FVBNJ_G0032988	Hras	85	36.420
MGP_FVBNJ_G0023335	Rab11b	93	46.763	MGP_FVBNJ_G0019682	Rab15	82	44.000
MGP_FVBNJ_G0023335	Rab11b	98	53.425	MGP_FVBNJ_G0017895	Rab1a	100	45.581
MGP_FVBNJ_G0023335	Rab11b	93	44.604	MGP_FVBNJ_G0032289	Rab30	97	39.524
MGP_FVBNJ_G0023335	Rab11b	93	57.246	MGP_FVBNJ_G0027821	Rab2a	81	55.556
MGP_FVBNJ_G0023335	Rab11b	62	41.935	MGP_FVBNJ_G0030777	Rab7	93	42.857
MGP_FVBNJ_G0023335	Rab11b	89	42.336	MGP_FVBNJ_G0035852	Rab9b	86	41.040
MGP_FVBNJ_G0023335	Rab11b	93	31.333	MGP_FVBNJ_G0030152	Rasl11a	62	31.333
MGP_FVBNJ_G0023335	Rab11b	97	100.000	MGP_FVBNJ_G0034698	Rab11a	100	96.078
MGP_FVBNJ_G0023335	Rab11b	65	30.986	MGP_FVBNJ_G0016364	Arl8a	72	30.986
MGP_FVBNJ_G0023335	Rab11b	93	43.885	MGP_FVBNJ_G0023781	Rab12	70	37.736
MGP_FVBNJ_G0023335	Rab11b	89	48.872	MGP_FVBNJ_G0017710	Rab5b	90	43.627
MGP_FVBNJ_G0023335	Rab11b	91	42.222	MGP_FVBNJ_G0023772	Rab31	86	40.476
MGP_FVBNJ_G0023335	Rab11b	81	34.426	MGP_FVBNJ_G0027476	Nras	95	37.241
MGP_FVBNJ_G0023335	Rab11b	77	40.000	MGP_FVBNJ_G0022049	Rabl2	69	36.943
MGP_FVBNJ_G0023335	Rab11b	95	47.887	MGP_FVBNJ_G0023927	Rab18	78	47.531
MGP_FVBNJ_G0023335	Rab11b	77	32.203	MGP_FVBNJ_G0019032	Arl4d	57	32.203
MGP_FVBNJ_G0023335	Rab11b	89	34.586	MGP_FVBNJ_G0029129	Rheb	89	34.146
MGP_FVBNJ_G0023335	Rab11b	95	55.634	MGP_FVBNJ_G0024493	Rab1b	99	48.095
MGP_FVBNJ_G0023335	Rab11b	90	43.382	MGP_FVBNJ_G0026992	Rab33b	76	39.773
MGP_FVBNJ_G0023335	Rab11b	81	33.884	MGP_FVBNJ_G0031251	Kras	93	34.066
MGP_FVBNJ_G0023335	Rab11b	81	39.669	MGP_FVBNJ_G0031358	Rasl2-9	70	37.013
MGP_FVBNJ_G0023335	Rab11b	93	56.522	MGP_FVBNJ_G0021106	Rab2b	99	48.387
MGP_FVBNJ_G0023335	Rab11b	81	31.405	MGP_FVBNJ_G0034931	Mras	81	34.706
MGP_FVBNJ_G0023335	Rab11b	91	42.963	MGP_FVBNJ_G0026758	Rab22a	81	42.675
MGP_FVBNJ_G0023335	Rab11b	89	48.120	MGP_FVBNJ_G0023683	Rab5a	90	41.667
MGP_FVBNJ_G0023335	Rab11b	94	34.123	MGP_FVBNJ_G0017181	Rab36	79	34.123
MGP_FVBNJ_G0023335	Rab11b	97	53.793	MGP_FVBNJ_G0025457	Rab14	97	53.741
MGP_FVBNJ_G0023335	Rab11b	90	49.265	MGP_FVBNJ_G0035613	Rab39b	82	47.126
MGP_FVBNJ_G0023335	Rab11b	89	49.624	MGP_FVBNJ_G0018989	Rab5c	75	48.447