EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0023683 (Gene tree)
Gene ID: -
Gene Symbol: Rab5a
Alias: 2410015H04Rik|AI663973|AU021172|nnyRab5a
Full Name: RAB5A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 32389 bases
Position: chr17:51884861-51917249
Accession: 105926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0047876	MMR_HSR1	PF01926.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0047876	-	2172	-	MGP_FVBNJ_P0047876	215 (aa)	-	Q9CQD1

Gene Model

Click here to download MGP_FVBNJ_G0023683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0023683's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0023683	Rab5a	90	46.429	MGP_FVBNJ_G0024493	Rab1b	96	46.429
MGP_FVBNJ_G0023683	Rab5a	95	42.718	MGP_FVBNJ_G0034954	Rab6b	98	42.718
MGP_FVBNJ_G0023683	Rab5a	95	41.951	MGP_FVBNJ_G0019195	Rab37	93	41.951
MGP_FVBNJ_G0023683	Rab5a	81	43.678	MGP_FVBNJ_G0032289	Rab30	86	43.678
MGP_FVBNJ_G0023683	Rab5a	75	36.585	MGP_FVBNJ_G0035613	Rab39b	77	36.585
MGP_FVBNJ_G0023683	Rab5a	74	35.928	MGP_FVBNJ_G0022049	Rabl2	72	35.928
MGP_FVBNJ_G0023683	Rab5a	90	41.667	MGP_FVBNJ_G0023335	Rab11b	89	48.120
MGP_FVBNJ_G0023683	Rab5a	78	31.737	MGP_FVBNJ_G0031358	Rasl2-9	76	31.737
MGP_FVBNJ_G0023683	Rab5a	78	41.916	MGP_FVBNJ_G0021106	Rab2b	79	44.079
MGP_FVBNJ_G0023683	Rab5a	56	33.065	MGP_FVBNJ_G0030875	Arl8b	63	33.065
MGP_FVBNJ_G0023683	Rab5a	80	31.667	MGP_FVBNJ_G0031251	Kras	94	31.667
MGP_FVBNJ_G0023683	Rab5a	75	41.615	MGP_FVBNJ_G0027821	Rab2a	97	36.667
MGP_FVBNJ_G0023683	Rab5a	90	40.816	MGP_FVBNJ_G0023927	Rab18	93	40.816
MGP_FVBNJ_G0023683	Rab5a	90	49.231	MGP_FVBNJ_G0026758	Rab22a	98	49.231
MGP_FVBNJ_G0023683	Rab5a	91	41.951	MGP_FVBNJ_G0034698	Rab11a	88	48.148
MGP_FVBNJ_G0023683	Rab5a	82	31.667	MGP_FVBNJ_G0032988	Hras	94	31.667
MGP_FVBNJ_G0023683	Rab5a	76	32.727	MGP_FVBNJ_G0027476	Nras	99	34.667
MGP_FVBNJ_G0023683	Rab5a	89	38.614	MGP_FVBNJ_G0025457	Rab14	94	38.614
MGP_FVBNJ_G0023683	Rab5a	74	40.881	MGP_FVBNJ_G0019682	Rab15	75	40.881
MGP_FVBNJ_G0023683	Rab5a	55	30.159	MGP_FVBNJ_G0019521	Arl4a	60	30.159
MGP_FVBNJ_G0023683	Rab5a	100	87.500	MGP_FVBNJ_G0018989	Rab5c	100	87.500
MGP_FVBNJ_G0023683	Rab5a	91	30.244	MGP_FVBNJ_G0017181	Rab36	77	30.244
MGP_FVBNJ_G0023683	Rab5a	75	41.566	MGP_FVBNJ_G0035444	Rab33a	70	41.566
MGP_FVBNJ_G0023683	Rab5a	73	33.121	MGP_FVBNJ_G0029129	Rheb	85	33.121
MGP_FVBNJ_G0023683	Rab5a	91	47.449	MGP_FVBNJ_G0023772	Rab31	98	47.449
MGP_FVBNJ_G0023683	Rab5a	90	35.323	MGP_FVBNJ_G0035852	Rab9b	97	35.323
MGP_FVBNJ_G0023683	Rab5a	73	32.500	MGP_FVBNJ_G0018590	Rab34	62	32.500
MGP_FVBNJ_G0023683	Rab5a	100	81.860	MGP_FVBNJ_G0017710	Rab5b	100	81.860
MGP_FVBNJ_G0023683	Rab5a	90	43.814	MGP_FVBNJ_G0017895	Rab1a	95	43.814
MGP_FVBNJ_G0023683	Rab5a	90	34.328	MGP_FVBNJ_G0036009	Rab9	97	34.328
MGP_FVBNJ_G0023683	Rab5a	95	41.546	MGP_FVBNJ_G0032349	Rab6a	98	41.546
MGP_FVBNJ_G0023683	Rab5a	60	32.576	MGP_FVBNJ_G0016364	Arl8a	66	32.576
MGP_FVBNJ_G0023683	Rab5a	81	37.989	MGP_FVBNJ_G0023781	Rab12	62	37.989
MGP_FVBNJ_G0023683	Rab5a	90	40.704	MGP_FVBNJ_G0027195	Rab25	93	40.704
MGP_FVBNJ_G0023683	Rab5a	77	40.351	MGP_FVBNJ_G0026992	Rab33b	75	40.351