EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0023781 (Gene tree)
Gene ID: -
Gene Symbol: Rab12
Alias: 2900054P15Rik|AW555448|C77700
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 26077 bases
Position: chr17:64868756-64894832
Accession: 894284
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0048122	MMR_HSR1	PF01926.23	5.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0048125	-	669	-	-	- (aa)	-	-
MGP_FVBNJ_T0048124	-	381	-	-	- (aa)	-	-
MGP_FVBNJ_T0048123	-	629	-	-	- (aa)	-	-
MGP_FVBNJ_T0048122	-	2055	-	MGP_FVBNJ_P0048122	291 (aa)	-	P35283

Gene Model

Click here to download MGP_FVBNJ_G0023781's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0023781's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0023781	Rab12	58	40.588	MGP_FVBNJ_G0027195	Rab25	79	40.588
MGP_FVBNJ_G0023781	Rab12	70	37.799	MGP_FVBNJ_G0034698	Rab11a	90	43.796
MGP_FVBNJ_G0023781	Rab12	58	50.296	MGP_FVBNJ_G0017895	Rab1a	82	50.296
MGP_FVBNJ_G0023781	Rab12	73	33.023	MGP_FVBNJ_G0018590	Rab34	77	33.023
MGP_FVBNJ_G0023781	Rab12	62	42.308	MGP_FVBNJ_G0027821	Rab2a	85	42.308
MGP_FVBNJ_G0023781	Rab12	70	37.736	MGP_FVBNJ_G0023335	Rab11b	93	43.885
MGP_FVBNJ_G0023781	Rab12	66	36.869	MGP_FVBNJ_G0026992	Rab33b	83	36.224
MGP_FVBNJ_G0023781	Rab12	62	47.778	MGP_FVBNJ_G0032289	Rab30	88	47.778
MGP_FVBNJ_G0023781	Rab12	52	31.373	MGP_FVBNJ_G0031251	Kras	87	31.325
MGP_FVBNJ_G0023781	Rab12	75	36.000	MGP_FVBNJ_G0018989	Rab5c	86	38.806
MGP_FVBNJ_G0023781	Rab12	56	35.329	MGP_FVBNJ_G0035852	Rab9b	83	35.329
MGP_FVBNJ_G0023781	Rab12	72	42.925	MGP_FVBNJ_G0019682	Rab15	88	44.681
MGP_FVBNJ_G0023781	Rab12	55	40.252	MGP_FVBNJ_G0032349	Rab6a	76	40.252
MGP_FVBNJ_G0023781	Rab12	55	37.107	MGP_FVBNJ_G0026758	Rab22a	81	37.107
MGP_FVBNJ_G0023781	Rab12	56	49.697	MGP_FVBNJ_G0023927	Rab18	79	49.697
MGP_FVBNJ_G0023781	Rab12	57	42.262	MGP_FVBNJ_G0035613	Rab39b	78	42.262
MGP_FVBNJ_G0023781	Rab12	53	34.194	MGP_FVBNJ_G0022049	Rabl2	67	34.194
MGP_FVBNJ_G0023781	Rab12	63	37.696	MGP_FVBNJ_G0035444	Rab33a	68	41.104
MGP_FVBNJ_G0023781	Rab12	53	31.210	MGP_FVBNJ_G0034931	Mras	80	31.548
MGP_FVBNJ_G0023781	Rab12	54	30.818	MGP_FVBNJ_G0029129	Rheb	85	30.818
MGP_FVBNJ_G0023781	Rab12	63	35.326	MGP_FVBNJ_G0017710	Rab5b	85	35.326
MGP_FVBNJ_G0023781	Rab12	69	39.500	MGP_FVBNJ_G0021106	Rab2b	80	47.097
MGP_FVBNJ_G0023781	Rab12	58	49.704	MGP_FVBNJ_G0024493	Rab1b	84	49.704
MGP_FVBNJ_G0023781	Rab12	62	37.989	MGP_FVBNJ_G0023683	Rab5a	81	37.989
MGP_FVBNJ_G0023781	Rab12	54	38.462	MGP_FVBNJ_G0023772	Rab31	79	38.462
MGP_FVBNJ_G0023781	Rab12	69	30.583	MGP_FVBNJ_G0036009	Rab9	83	34.132
MGP_FVBNJ_G0023781	Rab12	55	42.593	MGP_FVBNJ_G0019195	Rab37	75	43.210
MGP_FVBNJ_G0023781	Rab12	67	37.755	MGP_FVBNJ_G0025457	Rab14	97	39.726
MGP_FVBNJ_G0023781	Rab12	52	30.464	MGP_FVBNJ_G0027476	Nras	97	30.405
MGP_FVBNJ_G0023781	Rab12	54	40.385	MGP_FVBNJ_G0034954	Rab6b	75	40.385