EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0023847 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpll
Alias: 2510028H02Rik|2810036L13Rik|AI256697|AI852082|Hnrpll
Full Name: heterogeneous nuclear ribonucleoprotein L-like
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 36322 bases
Position: chr17:78384219-78420540
Accession: 1919942
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0048327	RRM_5	PF13893.6	7.7e-62	1	2
MGP_FVBNJ_P0048327	RRM_5	PF13893.6	7.7e-62	2	2
MGP_FVBNJ_P0048328	RRM_5	PF13893.6	7.7e-62	1	2
MGP_FVBNJ_P0048328	RRM_5	PF13893.6	7.7e-62	2	2
MGP_FVBNJ_P0048327	RRM_1	PF00076.22	2.4e-21	1	2
MGP_FVBNJ_P0048327	RRM_1	PF00076.22	2.4e-21	2	2
MGP_FVBNJ_P0048328	RRM_1	PF00076.22	2.4e-21	1	2
MGP_FVBNJ_P0048328	RRM_1	PF00076.22	2.4e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0048327	-	3116	-	MGP_FVBNJ_P0048327	591 (aa)	-	Q921F4
MGP_FVBNJ_T0048332	-	4651	-	-	- (aa)	-	-
MGP_FVBNJ_T0048333	-	3019	-	-	- (aa)	-	-
MGP_FVBNJ_T0048330	-	1868	-	-	- (aa)	-	-
MGP_FVBNJ_T0048331	-	2765	-	-	- (aa)	-	-
MGP_FVBNJ_T0048329	-	2742	-	MGP_FVBNJ_P0048329	331 (aa)	-	-
MGP_FVBNJ_T0048328	-	3009	-	MGP_FVBNJ_P0048328	591 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0023847's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0023847's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0023847	Hnrnpll	60	66.332	MGP_FVBNJ_G0031741	-	100	63.393
MGP_FVBNJ_G0023847	Hnrnpll	57	30.000	MGP_FVBNJ_G0027611	Ptbp2	99	30.357