EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0023852 (Gene tree)
Gene ID: -
Gene Symbol: Dhx57
Alias: AW494914
Full Name: DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 51753 bases
Position: chr17:78601814-78653566
Accession: 2147067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0048341	zf-CCCH	PF00642.24	3.6e-06	1	1
MGP_FVBNJ_P0048342	zf-CCCH	PF00642.24	3.7e-06	1	1
MGP_FVBNJ_P0048341	DEAD	PF00270.29	2.3e-10	1	1
MGP_FVBNJ_P0048342	DEAD	PF00270.29	2.4e-10	1	1
MGP_FVBNJ_P0048341	HA2	PF04408.23	2.6e-17	1	1
MGP_FVBNJ_P0048342	HA2	PF04408.23	2.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0048342	-	5077	-	MGP_FVBNJ_P0048342	1388 (aa)	-	-
MGP_FVBNJ_T0048341	-	4918	XM_006523447	MGP_FVBNJ_P0048341	1335 (aa)	XP_006523510	Q6P5D3

Gene Model

Click here to download MGP_FVBNJ_G0023852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0023852's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0023852	Dhx57	55	50.800	MGP_FVBNJ_G0024201	Ythdc2	72	36.504
MGP_FVBNJ_G0023852	Dhx57	50	39.320	MGP_FVBNJ_G0033864	Dhx38	50	39.320
MGP_FVBNJ_G0023852	Dhx57	67	41.704	MGP_FVBNJ_G0027053	Dhx36	83	41.593
MGP_FVBNJ_G0023852	Dhx57	65	39.771	MGP_FVBNJ_G0020750	Dhx29	59	39.771
MGP_FVBNJ_G0023852	Dhx57	50	40.201	MGP_FVBNJ_G0019033	Dhx8	51	40.201
MGP_FVBNJ_G0023852	Dhx57	63	35.681	MGP_FVBNJ_G0016442	Dhx9	54	35.915
MGP_FVBNJ_G0023852	Dhx57	69	32.051	MGP_FVBNJ_G0035098	Dhx30	62	33.492
MGP_FVBNJ_G0023852	Dhx57	50	41.148	MGP_FVBNJ_G0026600	Dhx35	89	41.148