EuRBPDB

Description

Ensembl ID: MGP_FVBNJ_G0024080 (Gene tree)
Gene ID: -
Gene Symbol: Ankhd1
Alias: 1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085
Full Name: ankyrin repeat and KH domain containing 1
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 107987 bases
Position: chr18:33058210-33166196
Accession: 1921733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0049029	KH_1	PF00013.29	1.8e-14	1	1
MGP_FVBNJ_P0049021	KH_1	PF00013.29	4.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0049029	-	3518	-	MGP_FVBNJ_P0049029	1020 (aa)	-	-
MGP_FVBNJ_T0049028	-	500	-	-	- (aa)	-	-
MGP_FVBNJ_T0049031	-	860	-	MGP_FVBNJ_P0049031	168 (aa)	-	-
MGP_FVBNJ_T0049021	-	8466	-	MGP_FVBNJ_P0049021	2629 (aa)	-	-
MGP_FVBNJ_T0049020	-	641	-	MGP_FVBNJ_P0049020	213 (aa)	-	E9PUR0
MGP_FVBNJ_T0049023	-	1033	-	-	- (aa)	-	-
MGP_FVBNJ_T0049022	-	1005	-	MGP_FVBNJ_P0049022	334 (aa)	-	-
MGP_FVBNJ_T0049025	-	610	-	-	- (aa)	-	-
MGP_FVBNJ_T0049024	-	658	-	MGP_FVBNJ_P0049024	218 (aa)	-	-
MGP_FVBNJ_T0049027	-	523	-	MGP_FVBNJ_P0049027	90 (aa)	-	-
MGP_FVBNJ_T0049026	-	603	-	MGP_FVBNJ_P0049026	110 (aa)	-	-
MGP_FVBNJ_T0049030	-	2235	-	MGP_FVBNJ_P0049030	636 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0024080	Ankhd1	76	89.507	MGP_FVBNJ_G0029491	Ankrd17	88	89.358