EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0024402 (Gene tree)
Gene ID: -
Gene Symbol: Zfp236
Alias: AI447957|Gm335|LOC240456
Full Name: zinc finger protein 236
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 98922 bases
Position: chr18:78811479-78910400
Accession: 1926950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0049902	zf-C2H2	PF00096.26	9.9e-111	1	19
MGP_FVBNJ_P0049902	zf-C2H2	PF00096.26	9.9e-111	2	19
MGP_FVBNJ_P0049902	zf-C2H2	PF00096.26	9.9e-111	3	19
MGP_FVBNJ_P0049902	zf-C2H2	PF00096.26	9.9e-111	4	19
MGP_FVBNJ_P0049902	zf-C2H2	PF00096.26	9.9e-111	5	19
MGP_FVBNJ_P0049902	zf-C2H2	PF00096.26	9.9e-111	6	19
MGP_FVBNJ_P0049902	zf-C2H2	PF00096.26	9.9e-111	7	19
MGP_FVBNJ_P0049902	zf-C2H2	PF00096.26	9.9e-111	8	19
MGP_FVBNJ_P0049902	zf-C2H2	PF00096.26	9.9e-111	9	19
MGP_FVBNJ_P0049902	zf-C2H2	PF00096.26	9.9e-111	10	19
MGP_FVBNJ_P0049902	zf-C2H2	PF00096.26	9.9e-111	11	19
MGP_FVBNJ_P0049902	zf-C2H2	PF00096.26	9.9e-111	12	19
MGP_FVBNJ_P0049902	zf-C2H2	PF00096.26	9.9e-111	13	19
MGP_FVBNJ_P0049902	zf-C2H2	PF00096.26	9.9e-111	14	19
MGP_FVBNJ_P0049902	zf-C2H2	PF00096.26	9.9e-111	15	19
MGP_FVBNJ_P0049902	zf-C2H2	PF00096.26	9.9e-111	16	19
MGP_FVBNJ_P0049902	zf-C2H2	PF00096.26	9.9e-111	17	19
MGP_FVBNJ_P0049902	zf-C2H2	PF00096.26	9.9e-111	18	19
MGP_FVBNJ_P0049902	zf-C2H2	PF00096.26	9.9e-111	19	19
MGP_FVBNJ_P0049906	zf-C2H2	PF00096.26	6.8e-06	1	1
MGP_FVBNJ_P0049902	zf-met	PF12874.7	3e-05	1	4
MGP_FVBNJ_P0049902	zf-met	PF12874.7	3e-05	2	4
MGP_FVBNJ_P0049902	zf-met	PF12874.7	3e-05	3	4
MGP_FVBNJ_P0049902	zf-met	PF12874.7	3e-05	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0049902	-	9561	XM_006526490	MGP_FVBNJ_P0049902	1840 (aa)	XP_006526553	B2RR24
MGP_FVBNJ_T0049903	-	3227	-	MGP_FVBNJ_P0049903	42 (aa)	-	-
MGP_FVBNJ_T0049906	-	410	-	MGP_FVBNJ_P0049906	65 (aa)	-	-
MGP_FVBNJ_T0049904	-	6078	-	MGP_FVBNJ_P0049904	466 (aa)	-	-
MGP_FVBNJ_T0049905	-	665	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0024402's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0024402's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0024402	Zfp236	68	36.905	MGP_FVBNJ_G0018176	Zfp672	96	41.096
MGP_FVBNJ_G0024402	Zfp236	70	41.121	MGP_FVBNJ_G0033529	Zfp882	87	45.652
MGP_FVBNJ_G0024402	Zfp236	58	42.177	MGP_FVBNJ_G0032811	E430018J23Rik	71	42.177
MGP_FVBNJ_G0024402	Zfp236	78	40.690	MGP_FVBNJ_G0033745	Zfp319	87	40.690
MGP_FVBNJ_G0024402	Zfp236	81	53.333	MGP_FVBNJ_G0026728	Sall4	73	53.333
MGP_FVBNJ_G0024402	Zfp236	63	45.902	MGP_FVBNJ_G0018226	Zfp867	94	45.902
MGP_FVBNJ_G0024402	Zfp236	60	45.283	MGP_FVBNJ_G0020510	Rslcan18	70	45.283
MGP_FVBNJ_G0024402	Zfp236	74	42.857	MGP_FVBNJ_G0031902	Zfp715	69	40.816
MGP_FVBNJ_G0024402	Zfp236	62	44.068	MGP_FVBNJ_G0031599	Zfp61	57	42.857
MGP_FVBNJ_G0024402	Zfp236	65	42.727	MGP_FVBNJ_G0031594	Zfp114	66	42.727
MGP_FVBNJ_G0024402	Zfp236	69	43.902	MGP_FVBNJ_G0031595	Zfp111	77	45.455
MGP_FVBNJ_G0024402	Zfp236	65	43.119	MGP_FVBNJ_G0031597	Zfp108	73	43.119
MGP_FVBNJ_G0024402	Zfp236	62	39.806	MGP_FVBNJ_G0031592	Zfp112	52	42.742
MGP_FVBNJ_G0024402	Zfp236	76	38.554	MGP_FVBNJ_G0032835	Zfp646	76	34.940
MGP_FVBNJ_G0024402	Zfp236	80	46.575	MGP_FVBNJ_G0020511	Zfp759	97	37.975
MGP_FVBNJ_G0024402	Zfp236	63	42.697	MGP_FVBNJ_G0018082	Zfp454	75	42.982
MGP_FVBNJ_G0024402	Zfp236	70	43.411	MGP_FVBNJ_G0031593	Zfp235	67	43.411
MGP_FVBNJ_G0024402	Zfp236	76	37.143	MGP_FVBNJ_G0023058	Zscan10	99	37.143
MGP_FVBNJ_G0024402	Zfp236	63	42.500	MGP_FVBNJ_G0031630	Zfp574	95	41.304
MGP_FVBNJ_G0024402	Zfp236	62	44.643	MGP_FVBNJ_G0031349	-	66	44.643
MGP_FVBNJ_G0024402	Zfp236	69	40.260	MGP_FVBNJ_G0031348	Zfp865	78	44.643
MGP_FVBNJ_G0024402	Zfp236	69	42.727	MGP_FVBNJ_G0028827	Zbtb17	58	42.727
MGP_FVBNJ_G0024402	Zfp236	79	38.732	MGP_FVBNJ_G0023051	Zfp945	79	40.000
MGP_FVBNJ_G0024402	Zfp236	61	36.782	MGP_FVBNJ_G0016399	Zbtb41	61	38.824
MGP_FVBNJ_G0024402	Zfp236	60	44.545	MGP_FVBNJ_G0033900	Zfp1	67	44.545
MGP_FVBNJ_G0024402	Zfp236	53	44.348	MGP_FVBNJ_G0032810	Zfp747	76	46.429
MGP_FVBNJ_G0024402	Zfp236	60	36.242	MGP_FVBNJ_G0033983	Snai3	67	47.297
MGP_FVBNJ_G0024402	Zfp236	78	41.667	MGP_FVBNJ_G0026729	Zfp64	70	41.667
MGP_FVBNJ_G0024402	Zfp236	64	45.455	MGP_FVBNJ_G0030950	Zfp637	85	51.807
MGP_FVBNJ_G0024402	Zfp236	67	46.429	MGP_FVBNJ_G0031891	-	71	46.429
MGP_FVBNJ_G0024402	Zfp236	55	30.734	MGP_FVBNJ_G0031351	Zfp784	79	40.244
MGP_FVBNJ_G0024402	Zfp236	54	46.739	MGP_FVBNJ_G0029613	Gfi1	100	46.739
MGP_FVBNJ_G0024402	Zfp236	58	45.536	MGP_FVBNJ_G0032808	Zfp768	53	45.536
MGP_FVBNJ_G0024402	Zfp236	67	36.601	MGP_FVBNJ_G0031049	Zfp384	68	38.655
MGP_FVBNJ_G0024402	Zfp236	79	45.283	MGP_FVBNJ_G0023030	Zfp51	78	45.283
MGP_FVBNJ_G0024402	Zfp236	69	42.647	MGP_FVBNJ_G0031600	Zfp94	76	42.647
MGP_FVBNJ_G0024402	Zfp236	70	43.636	MGP_FVBNJ_G0026916	Mynn	62	48.864
MGP_FVBNJ_G0024402	Zfp236	90	31.818	MGP_FVBNJ_G0017006	Zbtb24	54	45.794
MGP_FVBNJ_G0024402	Zfp236	68	44.545	MGP_FVBNJ_G0026691	Zfp334	68	44.545
MGP_FVBNJ_G0024402	Zfp236	61	41.228	MGP_FVBNJ_G0026260	Zfp661	69	42.857
MGP_FVBNJ_G0024402	Zfp236	59	41.748	MGP_FVBNJ_G0018810	Zfp652	58	41.748
MGP_FVBNJ_G0024402	Zfp236	80	44.304	MGP_FVBNJ_G0030470	Repin1	99	41.667
MGP_FVBNJ_G0024402	Zfp236	70	46.296	MGP_FVBNJ_G0034174	Zfp26	70	46.364
MGP_FVBNJ_G0024402	Zfp236	69	42.222	MGP_FVBNJ_G0023028	Zfp677	78	42.222
MGP_FVBNJ_G0024402	Zfp236	62	43.023	MGP_FVBNJ_G0029280	Zbtb49	62	47.887
MGP_FVBNJ_G0024402	Zfp236	79	46.512	MGP_FVBNJ_G0031768	Zfp420	99	46.512
MGP_FVBNJ_G0024402	Zfp236	64	40.559	MGP_FVBNJ_G0021824	Zfp251	79	40.559
MGP_FVBNJ_G0024402	Zfp236	77	43.860	MGP_FVBNJ_G0030604	Prdm5	86	46.739