EuRBPDB

Description

Ensembl ID: MGP_FVBNJ_G0024809 (Gene tree)
Gene ID: -
Gene Symbol: Smarca2
Alias: 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 177614 bases
Position: chr19:23455381-23632994
Accession: 99603
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0051092	ResIII	PF04851.15	3.9e-08	1	1
MGP_FVBNJ_P0051093	ResIII	PF04851.15	4e-08	1	1
MGP_FVBNJ_P0051096	ResIII	PF04851.15	2.1e-06	1	1
MGP_FVBNJ_P0051096	BRK	PF07533.16	3.6e-17	1	1
MGP_FVBNJ_P0051092	BRK	PF07533.16	3.7e-17	1	1
MGP_FVBNJ_P0051093	BRK	PF07533.16	3.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0051104	-	788	-	MGP_FVBNJ_P0051104	224 (aa)	-	-
MGP_FVBNJ_T0051099	-	1584	-	-	- (aa)	-	-
MGP_FVBNJ_T0051098	-	661	-	-	- (aa)	-	-
MGP_FVBNJ_T0051109	-	1458	-	MGP_FVBNJ_P0051109	113 (aa)	-	-
MGP_FVBNJ_T0051108	-	508	-	MGP_FVBNJ_P0051108	83 (aa)	-	-
MGP_FVBNJ_T0051095	-	5949	-	MGP_FVBNJ_P0051095	1576 (aa)	-	-
MGP_FVBNJ_T0051094	-	5917	-	MGP_FVBNJ_P0051094	1512 (aa)	-	-
MGP_FVBNJ_T0051097	-	651	-	MGP_FVBNJ_P0051097	175 (aa)	-	-
MGP_FVBNJ_T0051096	-	4584	-	MGP_FVBNJ_P0051096	1527 (aa)	-	-
MGP_FVBNJ_T0051103	-	942	-	MGP_FVBNJ_P0051103	254 (aa)	-	-
MGP_FVBNJ_T0051102	-	929	-	MGP_FVBNJ_P0051102	254 (aa)	-	-
MGP_FVBNJ_T0051093	-	5866	-	MGP_FVBNJ_P0051093	1603 (aa)	-	-
MGP_FVBNJ_T0051092	-	5862	XM_006527281	MGP_FVBNJ_P0051092	1585 (aa)	XP_006527344	A0A140LHE2
MGP_FVBNJ_T0051107	-	835	-	MGP_FVBNJ_P0051107	235 (aa)	-	-
MGP_FVBNJ_T0051101	-	426	-	-	- (aa)	-	-
MGP_FVBNJ_T0051106	-	1856	-	MGP_FVBNJ_P0051106	236 (aa)	-	-
MGP_FVBNJ_T0051111	-	736	-	MGP_FVBNJ_P0051111	119 (aa)	-	-
MGP_FVBNJ_T0051110	-	966	-	MGP_FVBNJ_P0051110	119 (aa)	-	-
MGP_FVBNJ_T0051100	-	867	-	-	- (aa)	-	-
MGP_FVBNJ_T0051105	-	879	-	MGP_FVBNJ_P0051105	276 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0024809	Smarca2	98	73.829	MGP_FVBNJ_G0034215	Smarca4	93	80.949