EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0025138 (Gene tree)
Gene ID: -
Gene Symbol: Celf2
Alias: B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|ETR-3|Etr-3|Napor|Napor-2|mETR-3
Full Name: CUGBP%2C Elav-like family member 2
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 957439 bases
Position: chr2:3483074-4440512
Accession: 1338822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0052152	RRM_1	PF00076.22	2.5e-51	1	3
MGP_FVBNJ_P0052152	RRM_1	PF00076.22	2.5e-51	2	3
MGP_FVBNJ_P0052152	RRM_1	PF00076.22	2.5e-51	3	3
MGP_FVBNJ_P0052155	RRM_1	PF00076.22	2.5e-51	1	3
MGP_FVBNJ_P0052155	RRM_1	PF00076.22	2.5e-51	2	3
MGP_FVBNJ_P0052155	RRM_1	PF00076.22	2.5e-51	3	3
MGP_FVBNJ_P0052161	RRM_1	PF00076.22	2.6e-51	1	3
MGP_FVBNJ_P0052161	RRM_1	PF00076.22	2.6e-51	2	3
MGP_FVBNJ_P0052161	RRM_1	PF00076.22	2.6e-51	3	3
MGP_FVBNJ_P0052162	RRM_1	PF00076.22	2.6e-51	1	3
MGP_FVBNJ_P0052162	RRM_1	PF00076.22	2.6e-51	2	3
MGP_FVBNJ_P0052162	RRM_1	PF00076.22	2.6e-51	3	3
MGP_FVBNJ_P0052163	RRM_1	PF00076.22	2.7e-51	1	3
MGP_FVBNJ_P0052163	RRM_1	PF00076.22	2.7e-51	2	3
MGP_FVBNJ_P0052163	RRM_1	PF00076.22	2.7e-51	3	3
MGP_FVBNJ_P0052158	RRM_1	PF00076.22	3.1e-51	1	3
MGP_FVBNJ_P0052158	RRM_1	PF00076.22	3.1e-51	2	3
MGP_FVBNJ_P0052158	RRM_1	PF00076.22	3.1e-51	3	3
MGP_FVBNJ_P0052153	RRM_1	PF00076.22	3.2e-51	1	3
MGP_FVBNJ_P0052153	RRM_1	PF00076.22	3.2e-51	2	3
MGP_FVBNJ_P0052153	RRM_1	PF00076.22	3.2e-51	3	3
MGP_FVBNJ_P0052156	RRM_1	PF00076.22	3.2e-51	1	3
MGP_FVBNJ_P0052156	RRM_1	PF00076.22	3.2e-51	2	3
MGP_FVBNJ_P0052156	RRM_1	PF00076.22	3.2e-51	3	3
MGP_FVBNJ_P0052159	RRM_1	PF00076.22	3.4e-51	1	3
MGP_FVBNJ_P0052159	RRM_1	PF00076.22	3.4e-51	2	3
MGP_FVBNJ_P0052159	RRM_1	PF00076.22	3.4e-51	3	3
MGP_FVBNJ_P0052160	RRM_1	PF00076.22	4.9e-39	1	3
MGP_FVBNJ_P0052160	RRM_1	PF00076.22	4.9e-39	2	3
MGP_FVBNJ_P0052160	RRM_1	PF00076.22	4.9e-39	3	3
MGP_FVBNJ_P0052164	RRM_1	PF00076.22	5.8e-39	1	3
MGP_FVBNJ_P0052164	RRM_1	PF00076.22	5.8e-39	2	3
MGP_FVBNJ_P0052164	RRM_1	PF00076.22	5.8e-39	3	3
MGP_FVBNJ_P0052154	RRM_1	PF00076.22	6.1e-39	1	3
MGP_FVBNJ_P0052154	RRM_1	PF00076.22	6.1e-39	2	3
MGP_FVBNJ_P0052154	RRM_1	PF00076.22	6.1e-39	3	3
MGP_FVBNJ_P0052157	RRM_1	PF00076.22	6.5e-39	1	3
MGP_FVBNJ_P0052157	RRM_1	PF00076.22	6.5e-39	2	3
MGP_FVBNJ_P0052157	RRM_1	PF00076.22	6.5e-39	3	3
MGP_FVBNJ_P0052171	RRM_1	PF00076.22	7.5e-19	1	1
MGP_FVBNJ_P0052167	RRM_1	PF00076.22	2.4e-15	1	1
MGP_FVBNJ_P0052174	RRM_1	PF00076.22	2.2e-14	1	1
MGP_FVBNJ_P0052176	RRM_1	PF00076.22	1e-13	1	1
MGP_FVBNJ_P0052177	RRM_1	PF00076.22	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0052164	-	1996	-	MGP_FVBNJ_P0052164	460 (aa)	-	-
MGP_FVBNJ_T0052165	-	1996	-	MGP_FVBNJ_P0052165	443 (aa)	-	-
MGP_FVBNJ_T0052166	-	1240	-	-	- (aa)	-	-
MGP_FVBNJ_T0052167	-	1024	-	MGP_FVBNJ_P0052167	276 (aa)	-	-
MGP_FVBNJ_T0052160	-	2223	-	MGP_FVBNJ_P0052160	440 (aa)	-	-
MGP_FVBNJ_T0052161	-	1721	-	MGP_FVBNJ_P0052161	488 (aa)	-	-
MGP_FVBNJ_T0052162	-	2151	-	MGP_FVBNJ_P0052162	488 (aa)	-	-
MGP_FVBNJ_T0052163	-	2157	-	MGP_FVBNJ_P0052163	490 (aa)	-	-
MGP_FVBNJ_T0052168	-	4797	-	-	- (aa)	-	-
MGP_FVBNJ_T0052169	-	407	-	-	- (aa)	-	-
MGP_FVBNJ_T0052178	-	1972	-	-	- (aa)	-	-
MGP_FVBNJ_T0052173	-	2075	-	-	- (aa)	-	-
MGP_FVBNJ_T0052172	-	4815	-	-	- (aa)	-	-
MGP_FVBNJ_T0052179	-	769	-	-	- (aa)	-	-
MGP_FVBNJ_T0052153	-	8540	-	MGP_FVBNJ_P0052153	526 (aa)	-	-
MGP_FVBNJ_T0052152	-	7701	XM_006497333	MGP_FVBNJ_P0052152	484 (aa)	XP_006497396	Q9Z0H4
MGP_FVBNJ_T0052155	-	7474	-	MGP_FVBNJ_P0052155	484 (aa)	-	-
MGP_FVBNJ_T0052154	-	8658	-	MGP_FVBNJ_P0052154	478 (aa)	-	-
MGP_FVBNJ_T0052157	-	3851	-	MGP_FVBNJ_P0052157	472 (aa)	-	-
MGP_FVBNJ_T0052156	-	5455	-	MGP_FVBNJ_P0052156	526 (aa)	-	-
MGP_FVBNJ_T0052159	-	2525	-	MGP_FVBNJ_P0052159	520 (aa)	-	-
MGP_FVBNJ_T0052158	-	3407	-	MGP_FVBNJ_P0052158	508 (aa)	-	-
MGP_FVBNJ_T0052171	-	630	-	MGP_FVBNJ_P0052171	134 (aa)	-	-
MGP_FVBNJ_T0052170	-	923	-	-	- (aa)	-	-
MGP_FVBNJ_T0052177	-	331	-	MGP_FVBNJ_P0052177	46 (aa)	-	-
MGP_FVBNJ_T0052176	-	529	-	MGP_FVBNJ_P0052176	159 (aa)	-	-
MGP_FVBNJ_T0052175	-	4143	-	-	- (aa)	-	-
MGP_FVBNJ_T0052174	-	402	-	MGP_FVBNJ_P0052174	92 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0025138's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0025138's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0025138	Celf2	61	34.177	MGP_FVBNJ_G0032858	Tial1	65	31.481
MGP_FVBNJ_G0025138	Celf2	57	34.884	MGP_FVBNJ_G0026632	Pabpc1l	53	34.884
MGP_FVBNJ_G0025138	Celf2	64	43.210	MGP_FVBNJ_G0033102	Elavl1	81	43.210
MGP_FVBNJ_G0025138	Celf2	88	32.099	MGP_FVBNJ_G0035499	Rbmx	78	30.000
MGP_FVBNJ_G0025138	Celf2	58	37.209	MGP_FVBNJ_G0028517	Pabpc4	52	36.364
MGP_FVBNJ_G0025138	Celf2	94	83.333	MGP_FVBNJ_G0027344	Celf3	99	45.783
MGP_FVBNJ_G0025138	Celf2	79	80.952	MGP_FVBNJ_G0034657	Celf6	91	45.567
MGP_FVBNJ_G0025138	Celf2	87	33.333	MGP_FVBNJ_G0028225	Elavl2	83	39.506
MGP_FVBNJ_G0025138	Celf2	100	88.060	MGP_FVBNJ_G0025935	Celf1	100	80.082
MGP_FVBNJ_G0025138	Celf2	82	33.333	MGP_FVBNJ_G0017321	Cirbp	80	32.558
MGP_FVBNJ_G0025138	Celf2	61	35.714	MGP_FVBNJ_G0015880	Boll	61	39.216
MGP_FVBNJ_G0025138	Celf2	92	53.659	MGP_FVBNJ_G0017395	Celf5	69	63.504
MGP_FVBNJ_G0025138	Celf2	57	34.211	MGP_FVBNJ_G0022945	Pabpc6	51	34.211
MGP_FVBNJ_G0025138	Celf2	61	38.272	MGP_FVBNJ_G0028357	Elavl4	81	38.272
MGP_FVBNJ_G0025138	Celf2	90	55.556	MGP_FVBNJ_G0024008	Celf4	96	45.992
MGP_FVBNJ_G0025138	Celf2	82	34.667	MGP_FVBNJ_G0034229	Elavl3	73	40.741
MGP_FVBNJ_G0025138	Celf2	77	39.474	MGP_FVBNJ_G0035158	Rbms3	75	37.079
MGP_FVBNJ_G0025138	Celf2	51	35.443	MGP_FVBNJ_G0030747	Tia1	83	35.443