EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0025394 (Gene tree)
Gene ID: -
Gene Symbol: Fubp3
Alias: A330051M14Rik|AV006371|FBP3|Marta2
Full Name: far upstream element (FUSE) binding protein 3
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 44975 bases
Position: chr2:28322528-28367502
Accession: 2443699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0053678	KH_1	PF00013.29	1e-68	1	4
MGP_FVBNJ_P0053678	KH_1	PF00013.29	1e-68	2	4
MGP_FVBNJ_P0053678	KH_1	PF00013.29	1e-68	3	4
MGP_FVBNJ_P0053678	KH_1	PF00013.29	1e-68	4	4
MGP_FVBNJ_P0053682	KH_1	PF00013.29	1.1e-68	1	4
MGP_FVBNJ_P0053682	KH_1	PF00013.29	1.1e-68	2	4
MGP_FVBNJ_P0053682	KH_1	PF00013.29	1.1e-68	3	4
MGP_FVBNJ_P0053682	KH_1	PF00013.29	1.1e-68	4	4
MGP_FVBNJ_P0053685	KH_1	PF00013.29	7.6e-19	1	1
MGP_FVBNJ_P0053681	KH_1	PF00013.29	8.1e-11	1	1
MGP_FVBNJ_P0053678	KH_2	PF07650.17	7.7e-21	1	1
MGP_FVBNJ_P0053682	KH_2	PF07650.17	7.9e-21	1	1
MGP_FVBNJ_P0053685	KH_2	PF07650.17	1.4e-05	1	1
MGP_FVBNJ_P0053686	DUF1897	PF09005.10	4.2e-09	1	2
MGP_FVBNJ_P0053686	DUF1897	PF09005.10	4.2e-09	2	2
MGP_FVBNJ_P0053687	DUF1897	PF09005.10	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0053686	-	847	-	MGP_FVBNJ_P0053686	103 (aa)	-	-
MGP_FVBNJ_T0053687	-	437	-	MGP_FVBNJ_P0053687	52 (aa)	-	-
MGP_FVBNJ_T0053679	-	372	-	MGP_FVBNJ_P0053679	97 (aa)	-	-
MGP_FVBNJ_T0053678	-	3274	XM_006498126	MGP_FVBNJ_P0053678	569 (aa)	XP_006498189	A0A0A6YVV5
MGP_FVBNJ_T0053682	-	3652	-	MGP_FVBNJ_P0053682	575 (aa)	-	-
MGP_FVBNJ_T0053683	-	453	-	MGP_FVBNJ_P0053683	83 (aa)	-	-
MGP_FVBNJ_T0053680	-	1909	-	-	- (aa)	-	-
MGP_FVBNJ_T0053681	-	425	-	MGP_FVBNJ_P0053681	123 (aa)	-	-
MGP_FVBNJ_T0053684	-	908	-	MGP_FVBNJ_P0053684	191 (aa)	-	-
MGP_FVBNJ_T0053688	-	2346	-	-	- (aa)	-	-
MGP_FVBNJ_T0053685	-	1073	-	MGP_FVBNJ_P0053685	263 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0025394's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0025394's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0025394	Fubp3	88	32.370	MGP_FVBNJ_G0030750	Pcbp1	60	31.169
MGP_FVBNJ_G0025394	Fubp3	77	31.973	MGP_FVBNJ_G0017220	Pcbp3	85	31.973
MGP_FVBNJ_G0025394	Fubp3	70	36.000	MGP_FVBNJ_G0034992	Pcbp4	83	36.000
MGP_FVBNJ_G0025394	Fubp3	79	31.707	MGP_FVBNJ_G0027340	Tdrkh	74	31.707
MGP_FVBNJ_G0025394	Fubp3	96	64.324	MGP_FVBNJ_G0027771	Fubp1	94	59.208
MGP_FVBNJ_G0025394	Fubp3	58	30.000	MGP_FVBNJ_G0022476	Igf2bp2	66	30.000
MGP_FVBNJ_G0025394	Fubp3	95	58.824	MGP_FVBNJ_G0023742	Khsrp	84	48.682