EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0025503 (Gene tree)
Gene ID: -
Gene Symbol: Strbp
Alias: 6430510M02Rik|AI852513|C230082I21Rik|C86322|Spnr
Full Name: spermatid perinuclear RNA binding protein
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 221577 bases
Position: chr2:34326142-34547718
Accession: 104626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0054247	DZF	PF07528.14	1.1e-79	1	1
MGP_FVBNJ_P0054250	DZF	PF07528.14	1.1e-79	1	1
MGP_FVBNJ_P0054252	DZF	PF07528.14	1.9e-10	1	1
MGP_FVBNJ_P0054253	DZF	PF07528.14	1.5e-05	1	1
MGP_FVBNJ_P0054247	dsrm	PF00035.26	1.5e-25	1	2
MGP_FVBNJ_P0054247	dsrm	PF00035.26	1.5e-25	2	2
MGP_FVBNJ_P0054250	dsrm	PF00035.26	1.5e-25	1	2
MGP_FVBNJ_P0054250	dsrm	PF00035.26	1.5e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0054249	-	355	-	MGP_FVBNJ_P0054249	3 (aa)	-	-
MGP_FVBNJ_T0054248	-	625	-	-	- (aa)	-	-
MGP_FVBNJ_T0054247	-	16353	-	MGP_FVBNJ_P0054247	672 (aa)	-	-
MGP_FVBNJ_T0054251	-	1355	-	-	- (aa)	-	-
MGP_FVBNJ_T0054252	-	967	-	MGP_FVBNJ_P0054252	167 (aa)	-	-
MGP_FVBNJ_T0054253	-	746	-	MGP_FVBNJ_P0054253	128 (aa)	-	-
MGP_FVBNJ_T0054254	-	404	-	-	- (aa)	-	-
MGP_FVBNJ_T0054241	-	2940	XM_011239043	MGP_FVBNJ_P0054241	648 (aa)	XP_011237345	Q91WM1
MGP_FVBNJ_T0054250	-	3145	-	MGP_FVBNJ_P0054250	672 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0025503's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0025503's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0025503	Strbp	98	38.037	MGP_FVBNJ_G0017379	Zfr2	79	48.201
MGP_FVBNJ_G0025503	Strbp	100	59.559	MGP_FVBNJ_G0034207	Ilf3	98	57.391
MGP_FVBNJ_G0025503	Strbp	97	46.825	MGP_FVBNJ_G0021548	Zfr	100	53.443