EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0025539 (Gene tree)
Gene ID: -
Gene Symbol: Arl5a
Alias: 2410015N24Rik|2810410P22Rik|AA408731|AW610751|Arl5|T25534
Full Name: ADP-ribosylation factor-like 5A
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 27221 bases
Position: chr2:49069741-49096961
Accession: 1922673
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0054485	MMR_HSR1	PF01926.23	3.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0054485	-	5131	XM_011239204	MGP_FVBNJ_P0054485	179 (aa)	XP_011237506	Q80ZU0
MGP_FVBNJ_T0054486	-	451	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0025539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0025539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0025539	Arl5a	88	41.463	MGP_FVBNJ_G0016132	Arl4c	85	41.463
MGP_FVBNJ_G0025539	Arl5a	63	33.913	MGP_FVBNJ_G0020382	Arl10	55	33.913
MGP_FVBNJ_G0025539	Arl5a	99	35.000	MGP_FVBNJ_G0027090	Arl14	92	35.000
MGP_FVBNJ_G0025539	Arl5a	99	49.438	MGP_FVBNJ_G0022117	Arf3	98	49.438
MGP_FVBNJ_G0025539	Arl5a	91	38.095	MGP_FVBNJ_G0019032	Arl4d	84	38.095
MGP_FVBNJ_G0025539	Arl5a	93	42.771	MGP_FVBNJ_G0024550	Arl2	90	42.771
MGP_FVBNJ_G0025539	Arl5a	92	38.788	MGP_FVBNJ_G0021249	Arl11	94	38.788
MGP_FVBNJ_G0025539	Arl5a	96	42.197	MGP_FVBNJ_G0025015	Arl3	95	42.197
MGP_FVBNJ_G0025539	Arl5a	93	37.647	MGP_FVBNJ_G0022741	Arl6	91	37.647
MGP_FVBNJ_G0025539	Arl5a	99	49.438	MGP_FVBNJ_G0019094	Arf2	98	49.438
MGP_FVBNJ_G0025539	Arl5a	97	38.587	MGP_FVBNJ_G0026817	Arfrp1	93	38.938
MGP_FVBNJ_G0025539	Arl5a	99	49.438	MGP_FVBNJ_G0018220	Arf1	98	49.438
MGP_FVBNJ_G0025539	Arl5a	100	45.556	MGP_FVBNJ_G0030280	Arf5	100	45.556
MGP_FVBNJ_G0025539	Arl5a	89	41.566	MGP_FVBNJ_G0019521	Arl4a	83	41.566
MGP_FVBNJ_G0025539	Arl5a	98	72.000	MGP_FVBNJ_G0018869	Arl5c	98	72.000
MGP_FVBNJ_G0025539	Arl5a	91	50.307	MGP_FVBNJ_G0017463	Arl1	98	49.438
MGP_FVBNJ_G0025539	Arl5a	100	79.888	MGP_FVBNJ_G0025172	Arl5b	98	81.437