EuRBPDB

Description

Ensembl ID: MGP_FVBNJ_G0025935 (Gene tree)
Gene ID: -
Gene Symbol: Celf1
Alias: 1600010O03Rik|AA407467|Brunol2|CUG-BP|CUG-BP1|CUGBP|Cugbp|Cugbp1|D2Wsu101e|HNAB50|NAB50
Full Name: CUGBP%2C Elav-like family member 1
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 79415 bases
Position: chr2:87251917-87331331
Accession: 1342295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0055715	RRM_1	PF00076.22	4e-52	1	3
MGP_FVBNJ_P0055715	RRM_1	PF00076.22	4e-52	2	3
MGP_FVBNJ_P0055715	RRM_1	PF00076.22	4e-52	3	3
MGP_FVBNJ_P0055709	RRM_1	PF00076.22	4.2e-52	1	3
MGP_FVBNJ_P0055709	RRM_1	PF00076.22	4.2e-52	2	3
MGP_FVBNJ_P0055709	RRM_1	PF00076.22	4.2e-52	3	3
MGP_FVBNJ_P0055714	RRM_1	PF00076.22	5.2e-52	1	3
MGP_FVBNJ_P0055714	RRM_1	PF00076.22	5.2e-52	2	3
MGP_FVBNJ_P0055714	RRM_1	PF00076.22	5.2e-52	3	3
MGP_FVBNJ_P0055712	RRM_1	PF00076.22	6.6e-52	1	3
MGP_FVBNJ_P0055712	RRM_1	PF00076.22	6.6e-52	2	3
MGP_FVBNJ_P0055712	RRM_1	PF00076.22	6.6e-52	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0055716	-	489	-	-	- (aa)	-	-
MGP_FVBNJ_T0055714	-	7579	-	MGP_FVBNJ_P0055714	513 (aa)	-	-
MGP_FVBNJ_T0055715	-	4432	-	MGP_FVBNJ_P0055715	483 (aa)	-	-
MGP_FVBNJ_T0055712	-	7008	-	MGP_FVBNJ_P0055712	543 (aa)	-	-
MGP_FVBNJ_T0055713	-	271	-	-	- (aa)	-	-
MGP_FVBNJ_T0055710	-	426	-	-	- (aa)	-	-
MGP_FVBNJ_T0055711	-	478	-	-	- (aa)	-	-
MGP_FVBNJ_T0055709	-	7851	-	MGP_FVBNJ_P0055709	487 (aa)	-	-
MGP_FVBNJ_T0055708	-	350	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0025935	Celf1	100	45.200	MGP_FVBNJ_G0024008	Celf4	100	42.430
MGP_FVBNJ_G0025935	Celf1	62	40.741	MGP_FVBNJ_G0028357	Elavl4	78	40.741
MGP_FVBNJ_G0025935	Celf1	61	45.679	MGP_FVBNJ_G0033102	Elavl1	83	45.679
MGP_FVBNJ_G0025935	Celf1	57	43.590	MGP_FVBNJ_G0034229	Elavl3	71	42.391
MGP_FVBNJ_G0025935	Celf1	52	35.526	MGP_FVBNJ_G0022945	Pabpc6	53	35.526
MGP_FVBNJ_G0025935	Celf1	98	45.135	MGP_FVBNJ_G0034657	Celf6	91	45.549
MGP_FVBNJ_G0025935	Celf1	69	41.975	MGP_FVBNJ_G0028225	Elavl2	85	41.975
MGP_FVBNJ_G0025935	Celf1	57	37.879	MGP_FVBNJ_G0026984	Pabpc4l	65	34.211
MGP_FVBNJ_G0025935	Celf1	100	80.082	MGP_FVBNJ_G0025138	Celf2	100	88.060
MGP_FVBNJ_G0025935	Celf1	98	44.650	MGP_FVBNJ_G0017395	Celf5	73	59.859
MGP_FVBNJ_G0025935	Celf1	53	43.421	MGP_FVBNJ_G0035158	Rbms3	68	43.421
MGP_FVBNJ_G0025935	Celf1	84	37.500	MGP_FVBNJ_G0028517	Pabpc4	88	32.258
MGP_FVBNJ_G0025935	Celf1	97	43.320	MGP_FVBNJ_G0027344	Celf3	99	43.830