EuRBPDB

Description

Ensembl ID: MGP_FVBNJ_G0026005 (Gene tree)
Gene ID: -
Gene Symbol: Caprin1
Alias: AL022980|Caprin-1|Gpiap|Gpiap1|Gpip137|M11s1|MMGPIP137|Mmgpip137|P137|RNG105|Rng105|caprin-1|rng105
Full Name: cell cycle associated protein 1
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 35817 bases
Position: chr2:99954573-99990389
Accession: 1858234
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0056151	Caprin-1_C	PF12287.8	1.8e-136	1	1
MGP_FVBNJ_P0056152	Caprin-1_C	PF12287.8	1.8e-136	1	1
MGP_FVBNJ_P0056153	Caprin-1_C	PF12287.8	3.2e-90	1	1
MGP_FVBNJ_P0056158	Caprin-1_C	PF12287.8	2.8e-25	1	1
MGP_FVBNJ_P0056154	Caprin-1_C	PF12287.8	3.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0056159	-	570	-	-	- (aa)	-	-
MGP_FVBNJ_T0056158	-	760	-	MGP_FVBNJ_P0056158	253 (aa)	-	-
MGP_FVBNJ_T0056155	-	816	-	-	- (aa)	-	-
MGP_FVBNJ_T0056154	-	856	-	MGP_FVBNJ_P0056154	93 (aa)	-	-
MGP_FVBNJ_T0056157	-	809	-	-	- (aa)	-	-
MGP_FVBNJ_T0056156	-	937	-	-	- (aa)	-	-
MGP_FVBNJ_T0056151	-	6169	XM_006499902	MGP_FVBNJ_P0056151	707 (aa)	XP_006499965	Q60865
MGP_FVBNJ_T0056153	-	1923	-	MGP_FVBNJ_P0056153	213 (aa)	-	-
MGP_FVBNJ_T0056152	-	4069	-	MGP_FVBNJ_P0056152	707 (aa)	-	-
MGP_FVBNJ_T0056160	-	478	-	-	- (aa)	-	-
MGP_FVBNJ_T0056161	-	879	-	-	- (aa)	-	-
MGP_FVBNJ_T0056162	-	555	-	-	- (aa)	-	-
MGP_FVBNJ_T0056163	-	828	-	-	- (aa)	-	-
MGP_FVBNJ_T0056164	-	391	-	-	- (aa)	-	-
MGP_FVBNJ_T0056165	-	626	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0026005	Caprin1	89	44.275	MGP_FVBNJ_G0031277	Caprin2	91	38.415