EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0026250 (Gene tree)
Gene ID: -
Gene Symbol: Ciao1
Alias: AW210570|Wdr39
Full Name: cytosolic iron-sulfur protein assembly 1
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 6892 bases
Position: chr2:123280926-123287817
Accession: 1346998
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0057183	eIF2A	PF08662.11	0.00029	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0057184	-	409	-	MGP_FVBNJ_P0057184	51 (aa)	-	-
MGP_FVBNJ_T0057181	-	1115	-	MGP_FVBNJ_P0057181	233 (aa)	-	-
MGP_FVBNJ_T0057180	-	3078	-	MGP_FVBNJ_P0057180	339 (aa)	-	Q99KN2
MGP_FVBNJ_T0057183	-	531	-	MGP_FVBNJ_P0057183	176 (aa)	-	-
MGP_FVBNJ_T0057182	-	581	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0026250's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0026250's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0026250	Ciao1	85	38.000	MGP_FVBNJ_G0034987	Poc1a	80	38.000
MGP_FVBNJ_G0026250	Ciao1	84	32.331	MGP_FVBNJ_G0023116	Tbl3	55	30.714
MGP_FVBNJ_G0026250	Ciao1	85	34.058	MGP_FVBNJ_G0022586	Wdr5b	85	34.058
MGP_FVBNJ_G0026250	Ciao1	91	36.735	MGP_FVBNJ_G0025322	Wdr5	90	36.735