EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0026371 (Gene tree)
Gene ID: -
Gene Symbol: Snrpb2
Alias: 2810052G09Rik
Full Name: U2 small nuclear ribonucleoprotein B
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 9816 bases
Position: chr2:139008806-139018621
Accession: 104805
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0057703	RRM_5	PF13893.6	8.3e-07	1	2
MGP_FVBNJ_P0057703	RRM_5	PF13893.6	8.3e-07	2	2
MGP_FVBNJ_P0057703	RRM_1	PF00076.22	2.9e-25	1	2
MGP_FVBNJ_P0057703	RRM_1	PF00076.22	2.9e-25	2	2
MGP_FVBNJ_P0057705	RRM_1	PF00076.22	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0057703	-	2061	-	MGP_FVBNJ_P0057703	225 (aa)	-	Q9CQI7
MGP_FVBNJ_T0057707	-	1827	-	-	- (aa)	-	-
MGP_FVBNJ_T0057706	-	594	-	-	- (aa)	-	-
MGP_FVBNJ_T0057705	-	636	-	MGP_FVBNJ_P0057705	143 (aa)	-	-
MGP_FVBNJ_T0057704	-	686	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0026371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0026371's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0026371	Snrpb2	99	63.121	MGP_FVBNJ_G0031680	Snrpa	97	55.235
MGP_FVBNJ_G0026371	Snrpb2	99	54.861	MGP_FVBNJ_G0023011	Gm5145	97	52.347