EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0026407 (Gene tree)
Gene ID: -
Gene Symbol: Gzf1
Alias: 8430437G08Rik|Zfp336|mGZF1
Full Name: GDNF-inducible zinc finger protein 1
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 11826 bases
Position: chr2:144568614-144580439
Accession: 1921783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0057851	zf-C2H2	PF00096.26	3.1e-34	1	6
MGP_FVBNJ_P0057851	zf-C2H2	PF00096.26	3.1e-34	2	6
MGP_FVBNJ_P0057851	zf-C2H2	PF00096.26	3.1e-34	3	6
MGP_FVBNJ_P0057851	zf-C2H2	PF00096.26	3.1e-34	4	6
MGP_FVBNJ_P0057851	zf-C2H2	PF00096.26	3.1e-34	5	6
MGP_FVBNJ_P0057851	zf-C2H2	PF00096.26	3.1e-34	6	6
MGP_FVBNJ_P0057851	zf-met	PF12874.7	6.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0057853	-	734	-	-	- (aa)	-	-
MGP_FVBNJ_T0057852	-	701	-	MGP_FVBNJ_P0057852	146 (aa)	-	-
MGP_FVBNJ_T0057851	-	4232	XM_006500304	MGP_FVBNJ_P0057851	706 (aa)	XP_006500367	Q4VBD9

Gene Model

Click here to download MGP_FVBNJ_G0026407's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0026407's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0026407	Gzf1	84	34.286	MGP_FVBNJ_G0016399	Zbtb41	54	34.286
MGP_FVBNJ_G0026407	Gzf1	51	46.193	MGP_FVBNJ_G0026916	Mynn	64	37.415
MGP_FVBNJ_G0026407	Gzf1	66	44.103	MGP_FVBNJ_G0029280	Zbtb49	62	46.479
MGP_FVBNJ_G0026407	Gzf1	64	37.349	MGP_FVBNJ_G0035206	Zfp651	51	37.349
MGP_FVBNJ_G0026407	Gzf1	83	37.118	MGP_FVBNJ_G0028827	Zbtb17	78	39.568