EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0026524 (Gene tree)
Gene ID: -
Gene Symbol: Raly
Alias: AI663842|Merc
Full Name: hnRNP-associated with lethal yellow
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 76851 bases
Position: chr2:150814833-150891683
Accession: 97850
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0058223	RRM_1	PF00076.22	1.8e-12	1	1
MGP_FVBNJ_P0058221	RRM_1	PF00076.22	3.8e-12	1	1
MGP_FVBNJ_P0058220	RRM_1	PF00076.22	7.1e-12	1	1
MGP_FVBNJ_P0058225	RRM_1	PF00076.22	7.1e-12	1	1
MGP_FVBNJ_P0058226	RRM_1	PF00076.22	7.5e-12	1	1
MGP_FVBNJ_P0058222	RRM_1	PF00076.22	8e-12	1	1
MGP_FVBNJ_P0058224	RRM_1	PF00076.22	8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0058229	-	337	-	-	- (aa)	-	-
MGP_FVBNJ_T0058228	-	404	-	-	- (aa)	-	-
MGP_FVBNJ_T0058225	-	1747	-	MGP_FVBNJ_P0058225	296 (aa)	-	-
MGP_FVBNJ_T0058224	-	1802	-	MGP_FVBNJ_P0058224	312 (aa)	-	-
MGP_FVBNJ_T0058227	-	1590	-	-	- (aa)	-	-
MGP_FVBNJ_T0058226	-	1100	-	MGP_FVBNJ_P0058226	298 (aa)	-	-
MGP_FVBNJ_T0058221	-	851	-	MGP_FVBNJ_P0058221	211 (aa)	-	-
MGP_FVBNJ_T0058220	-	1709	XM_006499013	MGP_FVBNJ_P0058220	296 (aa)	XP_006499076	Q64012
MGP_FVBNJ_T0058223	-	546	-	MGP_FVBNJ_P0058223	141 (aa)	-	-
MGP_FVBNJ_T0058222	-	1759	-	MGP_FVBNJ_P0058222	312 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0026524's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0026524's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0026524	Raly	54	35.526	MGP_FVBNJ_G0026611	Srsf6	56	35.526
MGP_FVBNJ_G0026524	Raly	72	74.757	MGP_FVBNJ_G0021102	Hnrnpc	72	52.814
MGP_FVBNJ_G0026524	Raly	51	32.500	MGP_FVBNJ_G0035499	Rbmx	77	32.500