EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0026704 (Gene tree)
Gene ID: -
Gene Symbol: Stau1
Alias: 5830401L18Rik|AW549911|C85792|Stau
Full Name: staufen (RNA binding protein) homolog 1 (Drosophila)
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 48897 bases
Position: chr2:163171898-163220794
Accession: 1338864
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0059086	dsrm	PF00035.26	1.2e-26	1	2
MGP_FVBNJ_P0059086	dsrm	PF00035.26	1.2e-26	2	2
MGP_FVBNJ_P0059083	dsrm	PF00035.26	1.2e-26	1	2
MGP_FVBNJ_P0059083	dsrm	PF00035.26	1.2e-26	2	2
MGP_FVBNJ_P0059087	dsrm	PF00035.26	1.4e-26	1	2
MGP_FVBNJ_P0059087	dsrm	PF00035.26	1.4e-26	2	2
MGP_FVBNJ_P0059085	dsrm	PF00035.26	2.3e-23	1	2
MGP_FVBNJ_P0059085	dsrm	PF00035.26	2.3e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0059086	-	2840	-	MGP_FVBNJ_P0059086	485 (aa)	-	-
MGP_FVBNJ_T0059087	-	2860	-	MGP_FVBNJ_P0059087	487 (aa)	-	-
MGP_FVBNJ_T0059084	-	3573	-	-	- (aa)	-	-
MGP_FVBNJ_T0059085	-	2976	-	MGP_FVBNJ_P0059085	495 (aa)	-	-
MGP_FVBNJ_T0059091	-	826	-	-	- (aa)	-	-
MGP_FVBNJ_T0059083	-	3569	XM_006499071	MGP_FVBNJ_P0059083	489 (aa)	XP_006499134	Q9Z108
MGP_FVBNJ_T0059093	-	341	-	-	- (aa)	-	-
MGP_FVBNJ_T0059092	-	788	-	-	- (aa)	-	-
MGP_FVBNJ_T0059088	-	774	-	-	- (aa)	-	-
MGP_FVBNJ_T0059089	-	1513	-	MGP_FVBNJ_P0059089	436 (aa)	-	-
MGP_FVBNJ_T0059090	-	862	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0026704's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0026704's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0026704	Stau1	86	48.055	MGP_FVBNJ_G0015703	Stau2	84	48.046
MGP_FVBNJ_G0026704	Stau1	52	31.395	MGP_FVBNJ_G0025672	Prkra	53	31.395