EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0026705 (Gene tree)
Gene ID: -
Gene Symbol: Ddx27
Alias: C86129
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 20256 bases
Position: chr2:163245577-163265832
Accession: 2385884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0059094	ResIII	PF04851.15	1.6e-06	1	1
MGP_FVBNJ_P0059094	DEAD	PF00270.29	7.1e-45	1	1
MGP_FVBNJ_P0059095	DEAD	PF00270.29	2.3e-18	1	1
MGP_FVBNJ_P0059096	DEAD	PF00270.29	5.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0059095	-	2151	-	MGP_FVBNJ_P0059095	292 (aa)	-	-
MGP_FVBNJ_T0059094	-	2714	XM_006499422	MGP_FVBNJ_P0059094	760 (aa)	XP_006499485	Q921N6
MGP_FVBNJ_T0059097	-	264	-	-	- (aa)	-	-
MGP_FVBNJ_T0059096	-	955	-	MGP_FVBNJ_P0059096	310 (aa)	-	-
MGP_FVBNJ_T0059099	-	708	-	-	- (aa)	-	-
MGP_FVBNJ_T0059098	-	649	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0026705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0026705's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0026705	Ddx27	53	31.019	MGP_FVBNJ_G0017849	Ddx56	98	33.065
MGP_FVBNJ_G0026705	Ddx27	59	33.696	MGP_FVBNJ_G0033461	Ddx49	97	38.177
MGP_FVBNJ_G0026705	Ddx27	52	34.129	MGP_FVBNJ_G0017135	Ddx50	61	34.272
MGP_FVBNJ_G0026705	Ddx27	56	32.558	MGP_FVBNJ_G0021887	Ddx17	56	33.880
MGP_FVBNJ_G0026705	Ddx27	51	35.938	MGP_FVBNJ_G0019865	Ddx24	56	35.938
MGP_FVBNJ_G0026705	Ddx27	54	31.655	MGP_FVBNJ_G0023433	Ddx39b	99	36.424