EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0026751 (Gene tree)
Gene ID: -
Gene Symbol: Rbm38
Alias: Rnpc1|Seb4|Seb4l
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 12833 bases
Position: chr2:169443652-169456484
Accession: 1889294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0059271	RRM_1	PF00076.22	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0059274	-	1527	-	-	- (aa)	-	-
MGP_FVBNJ_T0059271	-	1639	-	MGP_FVBNJ_P0059271	237 (aa)	-	-
MGP_FVBNJ_T0059270	-	2280	-	-	- (aa)	-	-
MGP_FVBNJ_T0059273	-	440	-	MGP_FVBNJ_P0059273	125 (aa)	-	-
MGP_FVBNJ_T0059272	-	620	-	MGP_FVBNJ_P0059272	107 (aa)	-	-
MGP_FVBNJ_T0059269	-	936	XM_006499923	MGP_FVBNJ_P0059269	78 (aa)	XP_006499986	Q62176

Gene Model

Click here to download MGP_FVBNJ_G0026751's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0026751's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0026751	Rbm38	66	46.809	MGP_FVBNJ_G0029738	Msi1	61	51.064
MGP_FVBNJ_G0026751	Rbm38	74	38.043	MGP_FVBNJ_G0017321	Cirbp	78	40.476
MGP_FVBNJ_G0026751	Rbm38	77	35.484	MGP_FVBNJ_G0017327	Dazap1	86	35.802
MGP_FVBNJ_G0026751	Rbm38	63	91.837	MGP_FVBNJ_G0020323	Rbm24	100	67.647
MGP_FVBNJ_G0026751	Rbm38	70	38.095	MGP_FVBNJ_G0018747	Msi2	80	34.074
MGP_FVBNJ_G0026751	Rbm38	51	36.364	MGP_FVBNJ_G0029552	Hnrnpd	51	36.364