EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0026817 (Gene tree)
Gene ID: -
Gene Symbol: Arfrp1
Alias: 1500006I01Rik|AI480700
Full Name: ADP-ribosylation factor related protein 1
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 7477 bases
Position: chr2:177925454-177932930
Accession: 1923938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0059571	MMR_HSR1	PF01926.23	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0059574	-	662	-	MGP_FVBNJ_P0059574	62 (aa)	-	-
MGP_FVBNJ_T0059576	-	555	-	-	- (aa)	-	-
MGP_FVBNJ_T0059567	-	2318	XM_011239965	MGP_FVBNJ_P0059567	121 (aa)	XP_011238267	Q8BXL7
MGP_FVBNJ_T0059575	-	434	-	-	- (aa)	-	-
MGP_FVBNJ_T0059572	-	835	-	-	- (aa)	-	-
MGP_FVBNJ_T0059573	-	748	-	-	- (aa)	-	-
MGP_FVBNJ_T0059570	-	1087	-	-	- (aa)	-	-
MGP_FVBNJ_T0059571	-	644	-	MGP_FVBNJ_P0059571	201 (aa)	-	-
MGP_FVBNJ_T0059569	-	1822	-	-	- (aa)	-	-
MGP_FVBNJ_T0059568	-	2179	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0026817's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0026817's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0026817	Arfrp1	84	36.538	MGP_FVBNJ_G0027090	Arl14	83	35.503
MGP_FVBNJ_G0026817	Arfrp1	93	31.304	MGP_FVBNJ_G0030875	Arl8b	74	31.724
MGP_FVBNJ_G0026817	Arfrp1	91	38.182	MGP_FVBNJ_G0024550	Arl2	97	35.106
MGP_FVBNJ_G0026817	Arfrp1	93	37.931	MGP_FVBNJ_G0022117	Arf3	96	33.333
MGP_FVBNJ_G0026817	Arfrp1	87	32.222	MGP_FVBNJ_G0019032	Arl4d	85	32.222
MGP_FVBNJ_G0026817	Arfrp1	87	37.273	MGP_FVBNJ_G0021249	Arl11	94	34.659
MGP_FVBNJ_G0026817	Arfrp1	92	40.000	MGP_FVBNJ_G0025015	Arl3	96	40.000
MGP_FVBNJ_G0026817	Arfrp1	93	33.929	MGP_FVBNJ_G0022741	Arl6	92	30.387
MGP_FVBNJ_G0026817	Arfrp1	91	40.000	MGP_FVBNJ_G0019521	Arl4a	90	34.896
MGP_FVBNJ_G0026817	Arfrp1	71	30.070	MGP_FVBNJ_G0016364	Arl8a	73	30.070
MGP_FVBNJ_G0026817	Arfrp1	85	36.416	MGP_FVBNJ_G0017463	Arl1	97	34.921
MGP_FVBNJ_G0026817	Arfrp1	84	40.196	MGP_FVBNJ_G0025172	Arl5b	92	37.126
MGP_FVBNJ_G0026817	Arfrp1	93	38.793	MGP_FVBNJ_G0018220	Arf1	96	33.871
MGP_FVBNJ_G0026817	Arfrp1	90	38.393	MGP_FVBNJ_G0030280	Arf5	94	34.225
MGP_FVBNJ_G0026817	Arfrp1	93	40.708	MGP_FVBNJ_G0018869	Arl5c	96	37.705
MGP_FVBNJ_G0026817	Arfrp1	93	38.938	MGP_FVBNJ_G0025539	Arl5a	97	38.587
MGP_FVBNJ_G0026817	Arfrp1	93	38.793	MGP_FVBNJ_G0019094	Arf2	96	33.333
MGP_FVBNJ_G0026817	Arfrp1	85	34.286	MGP_FVBNJ_G0016132	Arl4c	86	34.286