EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0027340 (Gene tree)
Gene ID: -
Gene Symbol: Tdrkh
Alias: 2700091C21Rik|Tdrd2
Full Name: tudor and KH domain containing protein
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 18220 bases
Position: chr3:89460963-89479182
Accession: 1919884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0061892	KH_1	PF00013.29	1.9e-34	1	2
MGP_FVBNJ_P0061892	KH_1	PF00013.29	1.9e-34	2	2
MGP_FVBNJ_P0061893	KH_1	PF00013.29	1.2e-33	1	2
MGP_FVBNJ_P0061893	KH_1	PF00013.29	1.2e-33	2	2
MGP_FVBNJ_P0061895	KH_1	PF00013.29	5.7e-28	1	2
MGP_FVBNJ_P0061895	KH_1	PF00013.29	5.7e-28	2	2
MGP_FVBNJ_P0061894	KH_1	PF00013.29	3e-19	1	1
MGP_FVBNJ_P0061894	TUDOR	PF00567.24	4.7e-29	1	1
MGP_FVBNJ_P0061895	TUDOR	PF00567.24	5.3e-29	1	1
MGP_FVBNJ_P0061893	TUDOR	PF00567.24	5.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0061894	-	2478	-	MGP_FVBNJ_P0061894	515 (aa)	-	-
MGP_FVBNJ_T0061895	-	2588	-	MGP_FVBNJ_P0061895	556 (aa)	-	-
MGP_FVBNJ_T0061892	-	1231	-	MGP_FVBNJ_P0061892	296 (aa)	-	-
MGP_FVBNJ_T0061893	-	1732	-	MGP_FVBNJ_P0061893	560 (aa)	-	-
MGP_FVBNJ_T0061891	-	476	XM_006502138	MGP_FVBNJ_P0061891	50 (aa)	XP_006502201	Q80VL1

Gene Model

Click here to download MGP_FVBNJ_G0027340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0027340's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0027340	Tdrkh	74	31.707	MGP_FVBNJ_G0025394	Fubp3	79	31.707
MGP_FVBNJ_G0027340	Tdrkh	52	30.625	MGP_FVBNJ_G0030491	Igf2bp3	55	30.625