EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0027415 (Gene tree)
Gene ID: -
Gene Symbol: Rbm8a
Alias: 2310057C03Rik|AA673428|Rbm8
Full Name: RNA binding motif protein 8a
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 4596 bases
Position: chr3:91737367-91741962
Accession: 1913129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0062274	RRM_1	PF00076.22	5.2e-18	1	1
MGP_FVBNJ_P0062273	RRM_1	PF00076.22	5.5e-18	1	1
MGP_FVBNJ_P0062275	RRM_1	PF00076.22	5.6e-18	1	1
MGP_FVBNJ_P0062273	RRM_3	PF08777.11	3.7e-06	1	1
MGP_FVBNJ_P0062275	RRM_3	PF08777.11	3.8e-06	1	1
MGP_FVBNJ_P0062274	RRM_3	PF08777.11	8.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0062277	-	560	-	-	- (aa)	-	-
MGP_FVBNJ_T0062276	-	464	-	-	- (aa)	-	-
MGP_FVBNJ_T0062275	-	1699	-	MGP_FVBNJ_P0062275	174 (aa)	-	-
MGP_FVBNJ_T0062274	-	2762	-	MGP_FVBNJ_P0062274	171 (aa)	-	-
MGP_FVBNJ_T0062273	-	2613	-	MGP_FVBNJ_P0062273	173 (aa)	-	Q9CWZ3

Gene Model

Click here to download MGP_FVBNJ_G0027415's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0027415's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0027415	Rbm8a	62	32.000	MGP_FVBNJ_G0033102	Elavl1	74	32.000
MGP_FVBNJ_G0027415	Rbm8a	54	35.870	MGP_FVBNJ_G0030747	Tia1	77	35.870
MGP_FVBNJ_G0027415	Rbm8a	57	31.313	MGP_FVBNJ_G0035499	Rbmx	73	32.000
MGP_FVBNJ_G0027415	Rbm8a	100	97.701	MGP_FVBNJ_G0016682	Rbm8a2	100	97.701
MGP_FVBNJ_G0027415	Rbm8a	62	30.693	MGP_FVBNJ_G0028357	Elavl4	54	33.784
MGP_FVBNJ_G0027415	Rbm8a	58	32.353	MGP_FVBNJ_G0028225	Elavl2	59	33.784