EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_FVBNJ_G0027611 (Gene tree)
Gene ID
-
Gene Symbol
Ptbp2
Alias
Brptb|Nptb|Ptb2|brPTB|nPTB
Full Name
polypyrimidine tract binding protein 2
Gene Type
protein_coding
Species
Mus_musculus_fvbnj
Status
putative
Strand
Minus strand
Length
64085 bases
Position
chr3:114596689-114660773
Accession
1860489
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_FVBNJ_P0063127RRM_5PF13893.63.3e-5313
MGP_FVBNJ_P0063127RRM_5PF13893.63.3e-5323
MGP_FVBNJ_P0063127RRM_5PF13893.63.3e-5333
MGP_FVBNJ_P0063128RRM_5PF13893.64e-5212
MGP_FVBNJ_P0063128RRM_5PF13893.64e-5222
MGP_FVBNJ_P0063133RRM_5PF13893.63.4e-2011
MGP_FVBNJ_P0063128RRM_1PF00076.225.9e-3313
MGP_FVBNJ_P0063128RRM_1PF00076.225.9e-3323
MGP_FVBNJ_P0063128RRM_1PF00076.225.9e-3333
MGP_FVBNJ_P0063127RRM_1PF00076.222e-3213
MGP_FVBNJ_P0063127RRM_1PF00076.222e-3223
MGP_FVBNJ_P0063127RRM_1PF00076.222e-3233
MGP_FVBNJ_P0063135RRM_1PF00076.222.5e-1011
MGP_FVBNJ_P0063133RRM_1PF00076.220.0002211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_FVBNJ_T0063134-4047--- (aa)--
MGP_FVBNJ_T0063128-3773-MGP_FVBNJ_P0063128531 (aa)--
MGP_FVBNJ_T0063129-1598-MGP_FVBNJ_P0063129356 (aa)--
MGP_FVBNJ_T0063139-389-MGP_FVBNJ_P006313949 (aa)--
MGP_FVBNJ_T0063138-454--- (aa)--
MGP_FVBNJ_T0063137-478--- (aa)--
MGP_FVBNJ_T0063136-654--- (aa)--
MGP_FVBNJ_T0063135-1742-MGP_FVBNJ_P0063135241 (aa)--
MGP_FVBNJ_T0063127-3364XM_006501731MGP_FVBNJ_P0063127532 (aa)XP_006501794Q91Z31
MGP_FVBNJ_T0063133-465-MGP_FVBNJ_P0063133155 (aa)--
MGP_FVBNJ_T0063132-491--- (aa)--
MGP_FVBNJ_T0063131-937--- (aa)--
MGP_FVBNJ_T0063130-576-MGP_FVBNJ_P006313033 (aa)--
Gene Model
Click here to download MGP_FVBNJ_G0027611's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0027611's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_FVBNJ_G0027611Ptbp29969.835MGP_FVBNJ_G0028119Ptbp39178.195
MGP_FVBNJ_G0027611Ptbp29930.357MGP_FVBNJ_G0023847Hnrnpll5730.000

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