EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0028225 (Gene tree)
Gene ID: -
Gene Symbol: Elavl2
Alias: Hub|mel-N1
Full Name: ELAV (embryonic lethal%2C abnormal vision%2C Drosophila)-like 2 (Hu antigen B)
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 149354 bases
Position: chr4:86696369-86845722
Accession: 1100887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0065963	RRM_5	PF13893.6	1.3e-12	1	2
MGP_FVBNJ_P0065963	RRM_5	PF13893.6	1.3e-12	2	2
MGP_FVBNJ_P0065960	RRM_5	PF13893.6	1.4e-12	1	2
MGP_FVBNJ_P0065960	RRM_5	PF13893.6	1.4e-12	2	2
MGP_FVBNJ_P0065961	RRM_5	PF13893.6	1.7e-12	1	2
MGP_FVBNJ_P0065961	RRM_5	PF13893.6	1.7e-12	2	2
MGP_FVBNJ_P0065962	RRM_5	PF13893.6	1.9e-12	1	2
MGP_FVBNJ_P0065962	RRM_5	PF13893.6	1.9e-12	2	2
MGP_FVBNJ_P0065966	RRM_5	PF13893.6	2.1e-12	1	2
MGP_FVBNJ_P0065966	RRM_5	PF13893.6	2.1e-12	2	2
MGP_FVBNJ_P0065965	RRM_5	PF13893.6	2.2e-12	1	2
MGP_FVBNJ_P0065965	RRM_5	PF13893.6	2.2e-12	2	2
MGP_FVBNJ_P0065963	RRM_1	PF00076.22	1.2e-66	1	3
MGP_FVBNJ_P0065963	RRM_1	PF00076.22	1.2e-66	2	3
MGP_FVBNJ_P0065963	RRM_1	PF00076.22	1.2e-66	3	3
MGP_FVBNJ_P0065960	RRM_1	PF00076.22	1.4e-66	1	3
MGP_FVBNJ_P0065960	RRM_1	PF00076.22	1.4e-66	2	3
MGP_FVBNJ_P0065960	RRM_1	PF00076.22	1.4e-66	3	3
MGP_FVBNJ_P0065961	RRM_1	PF00076.22	1.6e-66	1	3
MGP_FVBNJ_P0065961	RRM_1	PF00076.22	1.6e-66	2	3
MGP_FVBNJ_P0065961	RRM_1	PF00076.22	1.6e-66	3	3
MGP_FVBNJ_P0065962	RRM_1	PF00076.22	1.7e-66	1	3
MGP_FVBNJ_P0065962	RRM_1	PF00076.22	1.7e-66	2	3
MGP_FVBNJ_P0065962	RRM_1	PF00076.22	1.7e-66	3	3
MGP_FVBNJ_P0065965	RRM_1	PF00076.22	2e-66	1	3
MGP_FVBNJ_P0065965	RRM_1	PF00076.22	2e-66	2	3
MGP_FVBNJ_P0065965	RRM_1	PF00076.22	2e-66	3	3
MGP_FVBNJ_P0065966	RRM_1	PF00076.22	2e-66	1	3
MGP_FVBNJ_P0065966	RRM_1	PF00076.22	2e-66	2	3
MGP_FVBNJ_P0065966	RRM_1	PF00076.22	2e-66	3	3
MGP_FVBNJ_P0065968	RRM_1	PF00076.22	7.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0065968	-	425	-	MGP_FVBNJ_P0065968	125 (aa)	-	-
MGP_FVBNJ_T0065969	-	408	-	MGP_FVBNJ_P0065969	83 (aa)	-	-
MGP_FVBNJ_T0065962	-	3797	-	MGP_FVBNJ_P0065962	376 (aa)	-	-
MGP_FVBNJ_T0065963	-	3671	-	MGP_FVBNJ_P0065963	347 (aa)	-	-
MGP_FVBNJ_T0065960	-	3730	XM_006502778	MGP_FVBNJ_P0065960	360 (aa)	XP_006502841	Q60899
MGP_FVBNJ_T0065961	-	3840	-	MGP_FVBNJ_P0065961	373 (aa)	-	-
MGP_FVBNJ_T0065966	-	1282	-	MGP_FVBNJ_P0065966	389 (aa)	-	-
MGP_FVBNJ_T0065967	-	3195	-	-	- (aa)	-	-
MGP_FVBNJ_T0065964	-	930	-	-	- (aa)	-	-
MGP_FVBNJ_T0065965	-	1167	-	MGP_FVBNJ_P0065965	388 (aa)	-	-
MGP_FVBNJ_T0065971	-	450	-	-	- (aa)	-	-
MGP_FVBNJ_T0065972	-	415	-	-	- (aa)	-	-
MGP_FVBNJ_T0065970	-	511	-	MGP_FVBNJ_P0065970	23 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0028225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0028225's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0028225	Elavl2	59	33.784	MGP_FVBNJ_G0016682	Rbm8a2	58	32.353
MGP_FVBNJ_G0028225	Elavl2	89	36.145	MGP_FVBNJ_G0024168	Pabpc2	59	36.145
MGP_FVBNJ_G0028225	Elavl2	89	37.037	MGP_FVBNJ_G0035793	Pabpc5	94	37.037
MGP_FVBNJ_G0028225	Elavl2	63	32.911	MGP_FVBNJ_G0035297	Rbm3	82	38.710
MGP_FVBNJ_G0028225	Elavl2	58	31.169	MGP_FVBNJ_G0029552	Hnrnpd	70	32.000
MGP_FVBNJ_G0028225	Elavl2	89	76.375	MGP_FVBNJ_G0033102	Elavl1	94	76.375
MGP_FVBNJ_G0028225	Elavl2	69	37.209	MGP_FVBNJ_G0035158	Rbms3	83	37.222
MGP_FVBNJ_G0028225	Elavl2	59	33.784	MGP_FVBNJ_G0027415	Rbm8a	58	32.353
MGP_FVBNJ_G0028225	Elavl2	100	89.751	MGP_FVBNJ_G0028357	Elavl4	99	89.315
MGP_FVBNJ_G0028225	Elavl2	89	37.349	MGP_FVBNJ_G0021609	Pabpc1	54	37.349
MGP_FVBNJ_G0028225	Elavl2	96	34.615	MGP_FVBNJ_G0030747	Tia1	89	34.615
MGP_FVBNJ_G0028225	Elavl2	66	30.952	MGP_FVBNJ_G0028646	Trnau1ap	98	30.952
MGP_FVBNJ_G0028225	Elavl2	78	40.741	MGP_FVBNJ_G0034657	Celf6	89	37.037
MGP_FVBNJ_G0028225	Elavl2	89	34.940	MGP_FVBNJ_G0026984	Pabpc4l	96	34.940
MGP_FVBNJ_G0028225	Elavl2	88	39.506	MGP_FVBNJ_G0024008	Celf4	91	37.037
MGP_FVBNJ_G0028225	Elavl2	85	41.975	MGP_FVBNJ_G0025935	Celf1	69	41.975
MGP_FVBNJ_G0028225	Elavl2	64	37.500	MGP_FVBNJ_G0017321	Cirbp	76	37.500
MGP_FVBNJ_G0028225	Elavl2	67	35.714	MGP_FVBNJ_G0029866	Snrnp35	60	37.500
MGP_FVBNJ_G0028225	Elavl2	100	79.292	MGP_FVBNJ_G0034229	Elavl3	100	78.400
MGP_FVBNJ_G0028225	Elavl2	76	41.975	MGP_FVBNJ_G0027344	Celf3	63	41.975
MGP_FVBNJ_G0028225	Elavl2	60	41.558	MGP_FVBNJ_G0025569	Rbms1	51	37.209
MGP_FVBNJ_G0028225	Elavl2	83	39.506	MGP_FVBNJ_G0025138	Celf2	87	33.333
MGP_FVBNJ_G0028225	Elavl2	93	34.615	MGP_FVBNJ_G0032858	Tial1	72	34.615
MGP_FVBNJ_G0028225	Elavl2	89	34.940	MGP_FVBNJ_G0028517	Pabpc4	99	32.576
MGP_FVBNJ_G0028225	Elavl2	72	32.632	MGP_FVBNJ_G0018747	Msi2	70	31.250
MGP_FVBNJ_G0028225	Elavl2	97	30.857	MGP_FVBNJ_G0017395	Celf5	97	30.857
MGP_FVBNJ_G0028225	Elavl2	90	37.349	MGP_FVBNJ_G0022945	Pabpc6	60	37.349
MGP_FVBNJ_G0028225	Elavl2	73	34.831	MGP_FVBNJ_G0035499	Rbmx	86	34.831
MGP_FVBNJ_G0028225	Elavl2	92	34.940	MGP_FVBNJ_G0026632	Pabpc1l	64	34.940